- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.94 Å
- Oligo State
- homo-20-mer
- Ligands
- 40 x CL: CHLORIDE ION(Non-functional Binders)
- 13 x MG: MAGNESIUM ION(Non-covalent)
MG.13: 4 residues within 4Å:- Chain E: S.27
- Chain F: T.118
- Chain G: S.114, N.115
No protein-ligand interaction detected (PLIP)MG.14: 7 residues within 4Å:- Chain E: F.70, T.71, S.72, N.159
- Chain G: D.104, S.105, T.106
2 PLIP interactions:1 interactions with chain G, 1 interactions with chain E- Metal complexes: G:T.106, E:T.71
MG.17: 5 residues within 4Å:- Chain F: Q.83, R.119
- Chain G: Y.91, F.93, R.112
No protein-ligand interaction detected (PLIP)MG.18: 6 residues within 4Å:- Chain F: T.82, F.93, V.94, S.145, C.147, V.150
2 PLIP interactions:2 interactions with chain F- Metal complexes: F:F.93, F:S.145
MG.21: 10 residues within 4Å:- Chain G: T.82, L.84, T.85, P.86, S.92, T.118, R.119, A.120, C.147
- Chain H: Y.91
4 PLIP interactions:1 interactions with chain H, 3 interactions with chain G- Metal complexes: H:Y.91, G:T.82, G:L.84, G:S.92
MG.24: 9 residues within 4Å:- Chain I: T.82, L.84, T.85, P.86, S.92, R.119, A.120, C.147
- Chain J: Y.91
4 PLIP interactions:3 interactions with chain I, 1 interactions with chain J- Metal complexes: I:T.82, I:L.84, I:S.92, J:Y.91
MG.27: 7 residues within 4Å:- Chain K: P.86, Y.91, S.92, A.113, N.115, I.116, T.118
2 PLIP interactions:2 interactions with chain K- Metal complexes: K:S.92, K:I.116
MG.31: 8 residues within 4Å:- Chain 1: T.82, L.84, T.85, P.86, S.92, R.119, C.147
- Chain 2: Y.91
3 PLIP interactions:3 interactions with chain 1- Metal complexes: 1:T.82, 1:L.84, 1:S.92
MG.34: 9 residues within 4Å:- Chain 2: T.82, L.84, T.85, P.86, S.92, R.119, A.120, C.147
- Chain 3: Y.91
4 PLIP interactions:3 interactions with chain 2, 1 interactions with chain 3- Metal complexes: 2:T.82, 2:L.84, 2:S.92, 3:Y.91
MG.35: 7 residues within 4Å:- Chain 2: P.86, Y.91, S.92, A.113, N.115, I.116, T.118
3 PLIP interactions:3 interactions with chain 2- Metal complexes: 2:S.92, 2:I.116, 2:T.118
MG.44: 7 residues within 4Å:- Chain 4: T.82, S.92, F.93, S.145, C.147, Q.149, V.150
2 PLIP interactions:2 interactions with chain 4- Metal complexes: 4:S.145, 4:C.147
MG.45: 8 residues within 4Å:- Chain 4: T.82, L.84, T.85, P.86, S.92, R.119, C.147
- Chain 5: Y.91
4 PLIP interactions:1 interactions with chain 5, 3 interactions with chain 4- Metal complexes: 5:Y.91, 4:T.82, 4:L.84, 4:S.92
MG.51: 9 residues within 4Å:- Chain 1: Y.91
- Chain 5: T.82, L.84, T.85, P.86, S.92, R.119, A.120, C.147
4 PLIP interactions:3 interactions with chain 5, 1 interactions with chain 1- Metal complexes: 5:T.82, 5:L.84, 5:S.92, 1:Y.91
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McPherson, A., Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts. Acta Crystallogr.,Sect.F (2021)
- Release Date
- 2021-12-15
- Peptides
- Coat protein: ABCDEFGHIJKLMNO12345
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
O1
GG2
HH3
II4
JJ5
KK
SMTL ID : 5bkl.1
Crystallographic structure of the cubic crystal form of STMV (77.9 degree rotation) grown from NaCl
Coat protein
Toggle Identical (AHK12) Toggle Identical (B3) Toggle Identical (DEFIMN45)Related Entries With Identical Sequence
1a34.1 | 1a34.2 | 1a34.3 | 1a34.4 | 1a34.5 | 4nia.1 | 4oq8.1 | 4oq8.2 | 4oq8.3 | 4oq8.4 | 4oq8.5 | 4oq9.1 | 4oq9.2 | 4oq9.3 | 5bkn.1 | 5bkq.1 | 7m2t.1 | 7m2t.2 | 7m2t.3 | 7m2t.4 | 7m2t.5 | 7m2t.6 | 7m2t.7 | 7m2t.8 | 7m2t.9 | 7m2t.10 | 7m2t.11 | 7m2t.12 | 7m2t.13 | 7m2t.14 more...less...7m2t.15 | 7m2t.16 | 7m2t.17 | 7m2t.18 | 7m2t.19 | 7m2t.20 | 7m2t.21 | 7m2t.22 | 7m2t.23 | 7m2t.24 | 7m2t.25 | 7m2t.26 | 7m2t.27 | 7m2t.28 | 7m2t.29 | 7m2t.30 | 7m2v.1 | 7m3r.1 | 7m3t.1 | 7m50.1 | 7m54.1 | 7m57.1 | 7m57.2 | 7m57.3 | 7m57.4 | 7m57.5 | 7m57.6 | 7m57.7 | 7m57.8 | 7m57.9 | 7m57.10 | 7m57.11 | 7m57.12 | 7m57.13 | 7m57.14 | 7m57.15 | 7m57.16 | 7m57.17 | 7m57.18 | 7m57.19 | 7m57.20 | 7m57.21 | 7m57.22 | 7m57.23 | 7m57.24 | 7m57.25 | 7m57.26 | 7m57.27 | 7m57.28 | 7m57.29 | 7m57.30