SMTL ID : 5dv8.1

Human PPARgamma ligand binding dmain complexed with SB1451 in a covalent bonded form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

1 x T51: N-[2-({2-[({4-[(4-methylpiperazin-1-yl)methyl]benzoyl}amino)methyl]benzyl}oxy)phenyl]-3-nitrobenzamide(Covalent)

T51.1: 24 residues within 4Å: Chain A: I.72, K.73, F.74, K.75, H.76, I.91, F.92, G.94, C.95, Q.96, F.97, R.98, S.99, I.136, L.140, L.143, I.151, S.152, F.173, H.259, L.263, L.275, L.279, Y.283 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.74, A:F.92, A:F.97, A:R.98, A:I.136, A:L.140, A:L.143, A:I.151, A:F.173, A:F.173 Hydrogen bonds: A:G.94, A:C.95, A:S.152 pi-Cation interactions: A:K.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jang, J.Y., Human PPARgamma ligand binding dmain complexed with SB1451 in a covalent bonded form. To Be Published

Release Date

2016-09-21

Peptides

Peroxisome proliferator-activated receptor gamma: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

Nuclear receptor coactivator 1

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