SMTL ID : 5enm.1

Compound 10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: L.211, I.241, D.408, R.411, R.413 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.411, A:R.413

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 4 residues within 4Å: Chain A: H.107, T.165, E.166, S.167 Ligand excluded by PLIP

1 x 5QU: (2~{R},4~{S},6~{S})-4-[2,4-bis(fluoranyl)-5-pyrimidin-5-yl-phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-1,3-thiazinan-2-amine(Non-covalent)

5QU.3: 16 residues within 4Å: Chain A: G.73, Q.74, G.75, L.92, D.94, G.96, Y.133, T.134, Q.135, F.170, I.172, W.177, D.290, G.292, T.293, T.294 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.92, A:Y.133, A:Y.133, A:Q.135 Hydrogen bonds: A:D.94, A:D.94, A:T.134 Water bridges: A:G.75, A:T.294

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y.J. et al., Targeting the BACE1 Active Site Flap Leads to a Potent Inhibitor That Elicits Robust Brain A beta Reduction in Rodents. Acs Med.Chem.Lett. (2016)

Release Date

2016-10-05

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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