SMTL ID : 5nwt.1

Crystal Structure of Escherichia coli RNA polymerase - Sigma54 Holoenzyme complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.76 Å

Oligo State

hetero-2-1-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain D: C.70, C.72, C.85, C.88 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.70, D:C.72, D:C.85 ZN.3: 4 residues within 4Å: Chain D: C.814, C.888, C.895, C.898 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.814, D:C.888, D:C.895

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain D: D.460, D.462 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:D.462

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, Y. et al., TRANSCRIPTION. Structures of the RNA polymerase-Sigma54 reveal new and conserved regulatory strategies. Science (2015)

Release Date

2017-09-13

Peptides

DNA-directed RNA polymerase subunit alpha: AB
DNA-directed RNA polymerase subunit beta: C
DNA-directed RNA polymerase subunit beta': D
DNA-directed RNA polymerase subunit omega: E
RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
M

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA-directed RNA polymerase subunit omega

RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor

Related Entries With Identical Sequence