SMTL ID : 6x26.1

Mfd-bound E.coli RNA polymerase elongation complex - L1 state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain E: D.460, D.462, D.464 Chain G: A.20 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:D.460, E:D.460, E:D.462, E:D.464

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain E: C.70, C.72, C.85, K.87, C.88 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:C.72, E:C.85, E:C.88 ZN.3: 6 residues within 4Å: Chain E: C.814, R.883, C.888, D.889, C.895, C.898 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.814, E:C.888, E:C.895, E:C.898

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kang, J.Y. et al., Structural basis for transcription complex disruption by the Mfd translocase. Elife (2021)

Release Date

2021-02-03

Peptides

Transcription-repair-coupling factor: A
DNA-directed RNA polymerase subunit alpha: BC
DNA-directed RNA polymerase subunit beta: D
DNA-directed RNA polymerase subunit beta': E
DNA-directed RNA polymerase subunit omega: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
G

C
H

D
I

E
J

F
K

Transcription-repair-coupling factor

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA-directed RNA polymerase subunit omega

Related Entries With Identical Sequence