SMTL ID : 6bmx.1 (1 other biounit)

Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor SHP844

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.42 Å

Oligo State

monomer

Ligands

1 x DYV: 1-(3-chloro-4-{[1-(2-hydroxy-3-methoxyphenyl)-5-oxo[1,2,4]triazolo[4,3-a]quinazolin-4(5H)-yl]methyl}benzene-1-carbonyl)-L-proline(Non-covalent)

DYV.1: 15 residues within 4Å: Chain A: Q.80, Y.81, E.84, H.85, Q.88, L.263, Y.264, S.265, R.266, K.267, Q.270, K.275, K.281, N.282, L.284 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Q.80, A:E.84, A:K.267, A:Q.270 Hydrogen bonds: A:Q.80, A:Y.81, A:Q.88, A:L.263, A:R.266, A:R.266, A:Q.270, A:K.281 Water bridges: A:R.266 Salt bridges: A:H.85, A:K.281 pi-Stacking: A:Y.81 Halogen bonds: A:N.282

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: R.33, S.35, K.36, S.37, T.43 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.36, A:S.37, A:S.37 Water bridges: A:S.35 Salt bridges: A:R.33 PO4.3: 3 residues within 4Å: Chain A: N.218, R.221, K.493 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.218 Water bridges: A:S.135, A:P.216, A:K.493, A:K.493 Salt bridges: A:R.221, A:K.493 PO4.4: 3 residues within 4Å: Chain A: R.112, P.216, K.261 6 PLIP interactions: 6 interactions with chain A Water bridges: A:E.111, A:E.196, A:Q.257 Salt bridges: A:R.112, A:K.199, A:K.261

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fodor, M. et al., Dual Allosteric Inhibition of SHP2 Phosphatase. ACS Chem. Biol. (2018)

Release Date

2018-01-17

Peptides

Tyrosine-protein phosphatase non-receptor type 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 11

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