- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 40 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- 2 x F9F: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE(Non-covalent)
F9F.10: 19 residues within 4Å:- Chain A: F.22, E.49, A.59, I.64, L.100, L.127, A.129, I.153, Y.175, L.177, T.183, G.184, F.212, G.213, I.232, S.233, G.234, S.235
- Chain B: P.17
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:L.100, A:L.127, A:I.153, A:Y.175, A:T.183
- Hydrogen bonds: A:Y.175, A:G.184, A:F.212, A:G.213, A:G.234, A:S.235
- Water bridges: A:I.214, A:I.214, A:A.236
- pi-Stacking: A:F.212
F9F.43: 19 residues within 4Å:- Chain C: F.22, E.49, A.59, I.64, L.100, L.127, A.129, I.153, Y.175, L.177, T.183, G.184, F.212, G.213, I.232, S.233, G.234, S.235
- Chain D: P.17
14 PLIP interactions:14 interactions with chain C- Hydrophobic interactions: C:L.100, C:L.127, C:I.153, C:Y.175, C:T.183
- Hydrogen bonds: C:G.184, C:F.212, C:G.213, C:G.234, C:S.235
- Water bridges: C:I.214, C:I.214, C:A.236
- pi-Stacking: C:F.212
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.11: 9 residues within 4Å:- Chain A: F.107, I.111, E.135, P.138, F.139
- Chain B: Y.7, Y.15, I.277, K.282
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:Y.15, B:K.282, A:E.135
- Water bridges: B:Y.7, B:Y.7
PEG.44: 9 residues within 4Å:- Chain C: F.107, I.111, E.135, P.138, F.139
- Chain D: Y.7, Y.15, I.277, K.282
6 PLIP interactions:4 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:Y.7, D:K.282, C:E.135, C:E.135
- Water bridges: D:Y.15, D:Y.15
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.12: 4 residues within 4Å:- Chain A: P.217, S.257, F.258, A.261
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.257
EDO.26: 5 residues within 4Å:- Chain A: F.107
- Chain B: E.10, F.11, V.275, K.282
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.282, B:K.282
EDO.27: 5 residues within 4Å:- Chain B: I.64, T.337, H.341, M.361, R.362
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.341, B:R.362, B:R.362
EDO.28: 4 residues within 4Å:- Chain B: R.69, E.366, K.367, E.368
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.368, B:E.368
- Water bridges: B:R.69, B:E.366
EDO.29: 3 residues within 4Å:- Chain B: Q.35, Q.41
- Ligands: DMS.23
2 PLIP interactions:2 interactions with chain B- Water bridges: B:Q.35, B:Q.41
EDO.45: 4 residues within 4Å:- Chain C: P.217, S.257, F.258, A.261
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:S.257
EDO.59: 5 residues within 4Å:- Chain C: F.107
- Chain D: E.10, F.11, V.275, K.282
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:K.282, D:K.282
EDO.60: 5 residues within 4Å:- Chain D: I.64, T.337, H.341, M.361, R.362
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:H.341, D:R.362, D:R.362
EDO.61: 4 residues within 4Å:- Chain D: R.69, E.366, K.367, E.368
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:E.368, D:E.368
- Water bridges: D:R.69, D:E.366
EDO.62: 3 residues within 4Å:- Chain D: Q.35, Q.41
- Ligands: DMS.56
2 PLIP interactions:2 interactions with chain D- Water bridges: D:Q.35, D:Q.41
- 8 x CS: CESIUM ION(Non-covalent)
CS.13: 3 residues within 4Å:- Chain A: A.167, G.170, H.204
No protein-ligand interaction detected (PLIP)CS.30: 7 residues within 4Å:- Chain B: V.230, G.231, G.267, S.296, L.303, F.305, S.307
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:G.267
CS.31: 3 residues within 4Å:- Chain B: T.65, T.68, T.70
No protein-ligand interaction detected (PLIP)CS.32: 1 residues within 4Å:- Chain B: E.10
No protein-ligand interaction detected (PLIP)CS.46: 3 residues within 4Å:- Chain C: A.167, G.170, H.204
No protein-ligand interaction detected (PLIP)CS.63: 7 residues within 4Å:- Chain D: V.230, G.231, G.267, S.296, L.303, F.305, S.307
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:G.267
CS.64: 3 residues within 4Å:- Chain D: T.65, T.68, T.70
No protein-ligand interaction detected (PLIP)CS.65: 1 residues within 4Å:- Chain D: E.10
No protein-ligand interaction detected (PLIP)- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
PLP.14: 18 residues within 4Å:- Chain B: A.84, H.85, K.86, A.113, T.189, C.229, V.230, G.231, G.232, G.233, S.234, N.235, G.302, L.303, A.347, E.349, S.376, G.377
19 PLIP interactions:19 interactions with chain B- Hydrophobic interactions: B:A.84, B:K.86, B:A.347
- Hydrogen bonds: B:T.189, B:G.231, B:G.232, B:G.233, B:S.234, B:N.235, B:N.235, B:S.376
- Water bridges: B:T.189, B:T.189, B:S.234, B:S.234, B:A.236
- Salt bridges: B:H.85, B:K.86
- pi-Stacking: B:H.85
PLP.47: 18 residues within 4Å:- Chain D: A.84, H.85, K.86, A.113, T.189, C.229, V.230, G.231, G.232, G.233, S.234, N.235, G.302, L.303, A.347, E.349, S.376, G.377
18 PLIP interactions:18 interactions with chain D- Hydrophobic interactions: D:A.84, D:K.86, D:A.347
- Hydrogen bonds: D:T.189, D:T.189, D:G.231, D:G.232, D:G.233, D:S.234, D:N.235, D:N.235, D:S.376
- Water bridges: D:S.234, D:S.234, D:A.236
- Salt bridges: D:H.85, D:K.86
- pi-Stacking: D:H.85
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hilario, E. et al., Tryptophan synthase Q114A mutant (internal aldimine state) in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) with cesium ion bound in the metal coordination site. To be Published
- Release Date
- 2019-01-23
- Peptides
- Tryptophan synthase alpha chain: AC
Tryptophan synthase beta chain: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B
SMTL ID : 6c73.1
Tryptophan synthase Q114A mutant (internal aldimine state) in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) with cesium ion bound in the metal coordination site
Tryptophan synthase alpha chain
Toggle Identical (AC)Tryptophan synthase beta chain
Toggle Identical (BD)Related Entries With Identical Sequence
1a50.1 | 1a5s.1 | 1bks.1 | 1c29.1 | 1c8v.1 | 1c9d.1 | 1cw2.1 | 1cx9.1 | 1fuy.1 | 1k3u.1 | 1k7e.1 | 1k7f.1 | 1k7x.1 | 1k8y.1 | 1k8z.1 | 1kfj.1 | 1qoq.1 | 1tjp.1 | 1ttp.1 | 1ttq.1 | 1ubs.1 | 2cle.1 | 2clf.1 | 2clh.1 | 2cli.1 | 2cll.1 | 2clm.1 | 2clo.1 | 2j9x.1 | 2j9y.1 more...less...2rh9.1 | 2rhg.1 | 2trs.1 | 2tsy.1 | 2tys.1 | 2wsy.1 | 4hn4.1 | 4hpj.1 | 4hpx.1 | 4hpx.2 | 4ht3.1 | 4kkx.1 | 4wx2.1 | 4xug.1 | 4y6g.1 | 4zqc.1 | 5bw6.1 | 5cgq.1 | 6d0v.1 | 6duc.1 | 6dz4.1 | 6dzo.1 | 6o1h.1 | 6oso.1 | 6ouy.1 | 6vfd.1 | 6vnt.1 | 6wdu.1 | 6wx3.1 | 6x0c.1 | 6xe3.1 | 6xin.1 | 6xnc.1 | 6xoy.1 | 6xrh.1 | 6xsy.1 | 6xt0.1 | 7jhw.1 | 7jll.1 | 7jmq.1 | 7jmq.2 | 7jqw.1 | 7jtt.1 | 7k0b.1 | 7k5a.1 | 7ka1.1 | 7kbn.1 | 7kh6.1 | 7ki7.1 | 7kmc.1 | 7kq9.1 | 7kqf.1 | 7ku9.1 | 7kwv.1 | 7kxc.1 | 7kyt.1 | 7l03.1 | 7l1h.1 | 7l47.1 | 7l4d.1 | 7l5h.1 | 7lev.1 | 7lgx.1 | 7lkl.1 | 7lpf.1 | 7lt4.1 | 7ltp.1 | 7lut.1 | 7lv5.1 | 7lvx.1 | 7lx1.1 | 7ly8.1 | 7m2l.1 | 7m3s.1 | 7m3s.2 | 7me8.1 | 7mt4.1 | 7mt5.1 | 7mt6.1 | 8b05.1 | 8b06.1 | 8eyp.1 | 8eys.1 | 8ezc.1