- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x F9F: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE(Non-covalent)
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 4 residues within 4Å:- Chain A: E.134, E.135
- Chain B: Y.8
- Ligands: EDO.10
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Water bridges: A:E.134, A:E.135, A:E.135, B:Y.16
EDO.6: 4 residues within 4Å:- Chain B: T.3, L.4, L.5, N.6
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:L.4
EDO.10: 4 residues within 4Å:- Chain B: Y.8, G.10, E.11
- Ligands: EDO.2
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.10
EDO.13: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)EDO.14: 1 residues within 4Å:- Chain B: G.274
2 PLIP interactions:2 interactions with chain B- Water bridges: B:G.274, B:N.317
EDO.16: 4 residues within 4Å:- Chain C: E.134, E.135
- Chain D: Y.8
- Ligands: EDO.24
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain D- Water bridges: C:E.134, C:E.135, C:E.135, D:Y.16, D:Y.16
EDO.20: 4 residues within 4Å:- Chain D: T.3, L.4, L.5, N.6
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:L.4
EDO.24: 4 residues within 4Å:- Chain D: Y.8, G.10, E.11
- Ligands: EDO.16
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:G.10
EDO.27: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)EDO.28: 1 residues within 4Å:- Chain D: G.274
2 PLIP interactions:2 interactions with chain D- Water bridges: D:G.274, D:N.317
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x 0JO: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid(Non-covalent)
0JO.4: 24 residues within 4Å:- Chain B: A.85, H.86, K.87, T.110, G.111, A.112, G.113, Q.114, H.115, L.166, T.190, C.230, V.231, G.232, G.233, G.234, S.235, N.236, G.303, L.304, A.348, E.350, S.377, G.378
28 PLIP interactions:28 interactions with chain B- Hydrophobic interactions: B:A.85, B:L.166, B:A.348, B:E.350
- Hydrogen bonds: B:K.87, B:G.111, B:A.112, B:G.113, B:Q.114, B:H.115, B:T.190, B:G.232, B:G.233, B:G.234, B:S.235, B:S.235, B:N.236, B:N.236, B:S.377
- Water bridges: B:K.87, B:E.109, B:T.190, B:A.237, B:G.303
- Salt bridges: B:H.86, B:K.87, B:K.87
- pi-Stacking: B:H.86
0JO.18: 24 residues within 4Å:- Chain D: A.85, H.86, K.87, T.110, G.111, A.112, G.113, Q.114, H.115, L.166, T.190, C.230, V.231, G.232, G.233, G.234, S.235, N.236, G.303, L.304, A.348, E.350, S.377, G.378
28 PLIP interactions:28 interactions with chain D- Hydrophobic interactions: D:A.85, D:L.166, D:A.348, D:E.350
- Hydrogen bonds: D:K.87, D:T.110, D:G.111, D:A.112, D:G.113, D:Q.114, D:H.115, D:G.232, D:G.233, D:G.234, D:S.235, D:S.235, D:N.236, D:N.236, D:S.377
- Water bridges: D:K.87, D:E.109, D:T.190, D:A.237, D:G.303
- Salt bridges: D:H.86, D:K.87, D:K.87
- pi-Stacking: D:H.86
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 6 x BCN: BICINE(Non-covalent)
BCN.7: 5 residues within 4Å:- Chain A: T.77
- Chain B: T.289, A.290, D.291, Q.293
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:T.289, B:D.291
- Water bridges: B:A.290, B:A.290, B:A.290, B:D.291
- Salt bridges: B:D.291
BCN.8: 6 residues within 4Å:- Chain B: G.259, H.260, E.263, T.328, D.329, D.330
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:E.263, B:D.329, B:D.330, B:D.330
- Salt bridges: B:D.330
BCN.9: 8 residues within 4Å:- Chain B: T.248, S.249, V.250, G.251, L.252, G.320, R.321, D.323
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:S.249, B:L.252, B:L.252, B:R.321
- Salt bridges: B:R.321, B:D.323
BCN.21: 5 residues within 4Å:- Chain C: T.77
- Chain D: T.289, A.290, D.291, Q.293
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:D.291, D:D.291
- Water bridges: D:A.290, D:A.290, D:A.290, D:D.291
- Salt bridges: D:D.291
BCN.22: 6 residues within 4Å:- Chain D: G.259, H.260, E.263, T.328, D.329, D.330
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:E.263, D:T.328, D:D.329, D:D.330
- Water bridges: D:D.329
- Salt bridges: D:D.330
BCN.23: 8 residues within 4Å:- Chain D: T.248, S.249, V.250, G.251, L.252, G.320, R.321, D.323
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:S.249, D:L.252, D:L.252, D:R.321
- Salt bridges: D:R.321, D:D.323
- 4 x CS: CESIUM ION(Non-covalent)
CS.11: 6 residues within 4Å:- Chain B: V.231, G.232, G.268, L.304, F.306, S.308
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:F.306
CS.12: 3 residues within 4Å:- Chain B: T.66, T.69, T.71
2 PLIP interactions:1 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:T.71, H2O.26
CS.25: 6 residues within 4Å:- Chain D: V.231, G.232, G.268, L.304, F.306, S.308
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:F.306
CS.26: 3 residues within 4Å:- Chain D: T.66, T.69, T.71
2 PLIP interactions:1 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:T.71, H2O.57
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hilario, E. et al., The aminoacrylate form of the wild-type Salmonella typhimurium Tryptophan Synthase in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site and cesium ion at the metal coordination site at 1.30 Angstrom resolution. To be Published
- Release Date
- 2021-12-15
- Peptides
- Tryptophan synthase alpha chain: AC
Tryptophan synthase beta chain: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B
SMTL ID : 7kwv.1
The aminoacrylate form of the wild-type Salmonella typhimurium Tryptophan Synthase in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site and cesium ion at the metal coordination site at 1.30 Angstrom resolution
Tryptophan synthase alpha chain
Toggle Identical (AC)Tryptophan synthase beta chain
Toggle Identical (BD)Related Entries With Identical Sequence
1a50.1 | 1a5s.1 | 1bks.1 | 1c29.1 | 1c8v.1 | 1c9d.1 | 1cw2.1 | 1cx9.1 | 1fuy.1 | 1k3u.1 | 1k7e.1 | 1k7f.1 | 1k7x.1 | 1k8x.1 | 1k8y.1 | 1k8z.1 | 1kfc.1 | 1kfj.1 | 1kfk.1 | 1qoq.1 | 1tjp.1 | 1ttp.1 | 1ttq.1 | 1ubs.1 | 2cle.1 | 2clf.1 | 2clh.1 | 2cli.1 | 2cll.1 | 2clm.1 more...less...2clo.1 | 2j9x.1 | 2j9y.1 | 2rh9.1 | 2rhg.1 | 2trs.1 | 2tsy.1 | 2tys.1 | 2wsy.1 | 4hn4.1 | 4hpj.1 | 4hpx.1 | 4hpx.2 | 4ht3.1 | 4kkx.1 | 4wx2.1 | 4xug.1 | 4y6g.1 | 4zqc.1 | 5bw6.1 | 5cgq.1 | 6c73.1 | 6d0v.1 | 6duc.1 | 6dz4.1 | 6dzo.1 | 6o1h.1 | 6oso.1 | 6ouy.1 | 6vfd.1 | 6vnt.1 | 6wdu.1 | 6wx3.1 | 6x0c.1 | 6xe3.1 | 6xin.1 | 6xnc.1 | 6xoy.1 | 6xrh.1 | 6xsy.1 | 6xt0.1 | 7jhw.1 | 7jll.1 | 7jmq.1 | 7jmq.2 | 7jqw.1 | 7jtt.1 | 7k0b.1 | 7k5a.1 | 7ka1.1 | 7kbn.1 | 7kh6.1 | 7ki7.1 | 7kmc.1 | 7kq9.1 | 7kqf.1 | 7ku9.1 | 7kxc.1 | 7kyt.1 | 7l03.1 | 7l1h.1 | 7l47.1 | 7l4d.1 | 7l5h.1 | 7lev.1 | 7lgx.1 | 7lkl.1 | 7lpf.1 | 7lt4.1 | 7ltp.1 | 7lut.1 | 7lv5.1 | 7lvx.1 | 7lx1.1 | 7ly8.1 | 7m2l.1 | 7m3s.1 | 7m3s.2 | 7me8.1 | 7mt4.1 | 7mt5.1 | 7mt6.1 | 8b03.1 | 8b05.1 | 8b06.1 | 8b08.1 | 8eyp.1 | 8eys.1 | 8ezc.1