SMTL ID : 6fi6.1

Crystal structure of ERK2 in complex with an adenosine derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: E.190, Y.191, R.195, R.198, Y.237 4 PLIP interactions: 4 interactions with chain A Water bridges: A:Y.237, A:Y.237 Salt bridges: A:R.195, A:R.198

1 x DF8: (2~{R},3~{R},4~{S},5~{R})-2-(6-azanyl-8-diazanyl-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol(Non-covalent)

DF8.2: 13 residues within 4Å: Chain A: I.35, G.36, E.37, G.38, V.43, A.56, D.110, L.111, M.112, D.115, K.118, L.160, C.170 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.110, A:M.112, A:K.118 Water bridges: A:A.39, A:A.39, A:K.58, A:K.58, A:Q.109

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 3 residues within 4Å: Chain A: Y.117, K.155, S.157 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.157 pi-Cation interactions: A:Y.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gelin, M. et al., Crystal structure of ERK2 in complex with an adenosine derivative. To be published

Release Date

2019-01-30

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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