SMTL ID : 6xzv.1

Structure of zVDR LBD-Calcitriol in complex with chimera 18

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x G2Z- UIA- URL- MFH- URV- UZN- LYS: URA-UIA-URL-URY-URV-UZN-LYS(Non-covalent)

G2Z-UIA-URL-MFH-URV-UZN-LYS.1: 8 residues within 4Å: Chain A: I.119, K.123, A.133, Q.136, I.137, L.140, E.295, V.296 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.119, A:I.137, A:I.137, A:L.140, A:V.296 Hydrogen bonds: A:E.295, A:E.295, A:E.295

1 x VDX: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL(Non-covalent)

VDX.2: 17 residues within 4Å: Chain A: Y.24, Y.28, L.104, L.110, V.111, S.114, I.148, R.151, S.152, S.155, W.163, C.165, V.177, H.182, L.186, H.272, Y.276 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.24, A:L.104, A:L.110, A:W.163, A:V.177, A:V.177, A:L.186 Hydrogen bonds: A:Y.24, A:Y.24, A:S.114, A:R.151, A:H.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cussol, L. et al., Structural Basis for alpha-Helix Mimicry and Inhibition of Protein-Protein Interactions with Oligourea Foldamers. Angew.Chem.Int.Ed.Engl. (2021)

Release Date

2021-02-17

Peptides

Vitamin D3 receptor A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vitamin D3 receptor A

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