SMTL ID : 6y50.1

5'domain of human 17S U2 snRNP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain B: C.30, I.32, C.33, D.34, C.72, C.75 No protein-ligand interaction detected (PLIP) ZN.2: 5 residues within 4Å: Chain B: C.23, C.26, C.58, I.60, C.61 No protein-ligand interaction detected (PLIP) ZN.3: 5 residues within 4Å: Chain B: C.11, C.46, C.49, C.85, K.87 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:C.11, B:C.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Molecular architecture of the human 17S U2 snRNP. Nature (2020)

Release Date

2020-07-01

Peptides

Splicing factor 3A subunit 3: A
PHD finger-like domain-containing protein 5A: B
Splicing factor 3B subunit 5: C
Splicing factor 3B subunit 2: D
Splicing factor 3B subunit 3: E
Splicing factor 3B subunit 1: F
HIV Tat-specific factor 1: H
Probable ATP-dependent RNA helicase DDX46: I

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
9

B
y

C
x

D
8

E
v

F
u

H
q

I
p

Splicing factor 3A subunit 3

PHD finger-like domain-containing protein 5A

Splicing factor 3B subunit 5

Splicing factor 3B subunit 2

Splicing factor 3B subunit 3

Splicing factor 3B subunit 1

HIV Tat-specific factor 1

Probable ATP-dependent RNA helicase DDX46

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