SMTL ID : 7dp8.1

Crystal structure of T2R-TTL-Cevipabulin-eribulin complex

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.45 Å
Oligo State
hetero-2-2-1-1-mer
Ligands
3 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
5 x MG: MAGNESIUM ION(Non-covalent)
6 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)
2 x GOL: GLYCEROL(Non-functional Binders)
1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
2 x G2X: 6-[2,6-bis(fluoranyl)-4-[3-(methylamino)propoxy]phenyl]-5-chloranyl-N-[(2S)-1,1,1-tris(fluoranyl)propan-2-yl]-[1,2,4]triazolo[1,5-a]pyrimidin-7-amine(Non-covalent)
1 x 6K9: (1S,3S,6S,9S,12S,14R,16R,18S,20R,21R,22S,26R,29S,31R,32S,33R,35R,36S)-20-[(2S)-3-amino-2-hydroxypropyl]-21-methoxy-14-methyl-8,15-dimethylidene-2,19,30,34,37,39,40,41-octaoxanonacyclo[24.9.2.1~3,32~.1~3,33~.1~6,9~.1~12,16~.0~18,22~.0~29,36~.0~31,35~]hentetracontan-24-one (non-preferred name)(Non-covalent)
1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yang, J. et al., Cevipabulin-tubulin complex reveals a novel agent binding site on alpha-tubulin with tubulin degradation effect. Sci Adv (2021)
Release Date
2021-07-07
Peptides
Tubulin alpha-1B chain: AC
Tubulin beta chain: BD
Stathmin-4: E
Tubulin tyrosine ligase: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
B
B
D
D
E
E
F
F

Tubulin alpha-1B chain

Tubulin beta chain

Stathmin-4

Tubulin tyrosine ligase

Related Entries With Identical Sequence

4i4t.1 | 4i50.1 | 4i55.1 | 4ihj.1 | 4iij.1 | 4o2a.1 | 4o2b.1 | 4o4h.1 | 4o4i.1 | 4o4j.1 | 4o4l.1 | 4tuy.1 | 4tv8.1 | 4tv9.1 | 4yj2.1 | 4yj3.1 | 4zhq.1 | 4zi7.1 | 4zol.1 | 5bmv.1 | 5c8y.1 | 5ca0.1 | 5ca1.1 | 5cb4.1 | 5eyp.1 | 5ezy.1 | 5fnv.1 | 5h74.1 | 5h7o.1 | 5itz.1  more...