SMTL ID : 8a92.2 (1 other biounit)

p53-Y220C Core Domain in Complex with a Bromo-trifluoro-pyrazole-amine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.37 Å

Oligo State

monomer

Ligands

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 4 residues within 4Å: Chain A: K.8, Y.10, L.171, R.174 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.174

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.83, A:H.86, A:C.145, A:C.149

1 x LE9: 4-bromanyl-5-(trifluoromethyl)-1H-pyrazol-3-amine(Non-covalent)

LE9.3: 10 residues within 4Å: Chain A: L.52, V.54, T.57, P.58, C.127, E.128, P.129, P.130, C.136, T.137 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.57 Water bridges: A:E.128 Halogen bonds: A:L.52, A:T.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stahlecker, J. et al., Revisiting a challenging p53 binding site: a diversity-optimized HEFLib reveals diverse binding modes in T-p53C-Y220C. Rsc Med Chem (2022)

Release Date

2022-11-09

Peptides

Cellular tumor antigen p53: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cellular tumor antigen p53

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