SMTL ID : 8cg7.2 (1 other biounit)

Structure of p53 cancer mutant Y220C with arylation at Cys182 and Cys277

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: R.17, W.53, V.54, D.55 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.17, A:R.17, A:V.54, A:D.55, A:D.55 Water bridges: A:V.54, A:D.135

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.83, A:H.86, A:C.145, A:C.149

2 x 01: 5-iodanyl-2-methylsulfonyl-pyrimidine

01.3: 3 residues within 4Å: Chain A: H.85, C.89, S.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.90 01.4: 3 residues within 4Å: Chain A: K.27, A.183, C.184 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pichon, M.M. et al., Structure-Reactivity Studies of 2-Sulfonylpyrimidines Allow Selective Protein Arylation. Bioconjug.Chem. (2023)

Release Date

2023-12-13

Peptides

Cellular tumor antigen p53: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cellular tumor antigen p53

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