- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-1-1-mer
- Ligands
- 2 x TYR- DAL- PHE- GLU- VAL- VAL- GLY- NH2: deltorphin(Non-covalent)
- 5 x CLR: CHOLESTEROL(Non-covalent)
CLR.3: 4 residues within 4Å:- Chain A: M.90, F.99, L.103
- Ligands: CLR.4
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.99, A:L.103
CLR.4: 8 residues within 4Å:- Chain A: M.81, F.82, V.85, R.86, L.103, L.107, S.110
- Ligands: CLR.3
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:F.82, A:V.85, A:L.103, A:L.107
- Hydrogen bonds: A:R.86
CLR.14: 5 residues within 4Å:- Chain E: M.90, F.99, L.103, L.107
- Ligands: CLR.15
3 PLIP interactions:3 interactions with chain E- Hydrophobic interactions: E:F.99, E:L.103, E:L.107
CLR.15: 6 residues within 4Å:- Chain E: M.81, F.82, V.85, R.86, S.110
- Ligands: CLR.14
2 PLIP interactions:2 interactions with chain E- Hydrophobic interactions: E:V.85
- Hydrogen bonds: E:R.86
CLR.16: 7 residues within 4Å:- Chain E: V.189, I.193, P.213, W.219, T.223, V.227
- Ligands: PLM.11
7 PLIP interactions:7 interactions with chain E- Hydrophobic interactions: E:V.189, E:I.193, E:P.213, E:W.219, E:W.219, E:T.223, E:V.227
- 12 x PLM: PALMITIC ACID(Non-covalent)
PLM.5: 3 residues within 4Å:- Chain A: R.264, R.268, R.271
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:R.268
- Salt bridges: A:R.271
PLM.6: 6 residues within 4Å:- Chain A: A.285, P.286, F.290, V.293
- Chain E: A.285, P.286
4 PLIP interactions:2 interactions with chain E, 2 interactions with chain A- Hydrophobic interactions: E:A.285, E:P.286, A:A.285, A:F.290
PLM.7: 3 residues within 4Å:- Chain A: Y.157, H.162, V.241
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.162
PLM.8: 2 residues within 4Å:- Chain A: A.71, L.120
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:A.71
PLM.9: 8 residues within 4Å:- Chain A: Y.139, V.189, I.193, M.196, P.213, W.219, T.223, V.227
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:Y.139, A:V.189, A:P.213, A:W.219, A:W.219, A:T.223, A:V.227
PLM.10: 3 residues within 4Å:- Chain A: I.299
- Chain E: A.279, L.316
3 PLIP interactions:2 interactions with chain E, 1 interactions with chain A- Hydrophobic interactions: E:A.279, E:L.316, A:I.299
PLM.11: 3 residues within 4Å:- Chain A: R.251
- Chain E: C.226
- Ligands: CLR.16
No protein-ligand interaction detected (PLIP)PLM.12: 5 residues within 4Å:- Chain A: A.279, V.282, L.316
- Chain E: V.297, I.299
4 PLIP interactions:2 interactions with chain E, 2 interactions with chain A- Hydrophobic interactions: E:V.297, E:V.297, A:V.282, A:L.316
PLM.13: 3 residues within 4Å:- Chain A: W.219, C.226
- Chain E: R.251
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:W.219
PLM.17: 3 residues within 4Å:- Chain E: R.268, R.271, L.327
3 PLIP interactions:3 interactions with chain E- Hydrophobic interactions: E:R.268, E:L.327
- Salt bridges: E:R.271
PLM.18: 5 residues within 4Å:- Chain E: Y.157, H.162, L.237, I.238, V.241
4 PLIP interactions:4 interactions with chain E- Hydrophobic interactions: E:L.237, E:I.238, E:V.241
- Salt bridges: E:H.162
PLM.19: 3 residues within 4Å:- Chain E: S.67, A.71, L.120
1 PLIP interactions:1 interactions with chain E- Hydrophobic interactions: E:A.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, Y. et al., Structures of the entire human opioid receptor family. Cell (2023)
- Release Date
- 2022-12-14
- Peptides
- Delta-type opioid receptor: AE
Guanine nucleotide-binding protein G(i) subunit alpha-1: BF
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
RE
DB
AF
FC
BD
C - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 8f7s.1
Gi bound delta-opioid receptor in complex with deltorphin
Delta-type opioid receptor
Toggle Identical (AE)Guanine nucleotide-binding protein G(i) subunit alpha-1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Related Entries With Identical Sequence
3sn6.1 | 5tdh.1 | 5tdh.2 | 5uz7.1 | 5vai.1 | 6cmo.1 | 6pt0.1 | 6wwz.1 | 7eo2.1 | 7eo4.1 | 7ezh.1 | 7rmg.1 | 7rmh.1 | 7rmi.1 | 7sqo.1 | 7wf7.1 | 7x2v.1 | 7xa3.1 | 7y1f.1 | 8ef5.1 | 8ef6.1 | 8efb.1 | 8efl.1 | 8efo.1 | 8efq.1 | 8f7q.1 | 8f7r.1 | 8f7w.1 | 8f7x.1 | 8g94.1 more...less...8gcm.1 | 8gcp.1 | 8gdc.1 | 8hbd.1 | 8hnk.1 | 8hnl.1 | 8hnm.1 | 8hqe.1 | 8hqm.1 | 8hqn.1 | 8hvi.1 | 8iy5.1 | 8j6i.1 | 8jxt.1 | 8jxv.1 | 8jxx.1 | 8k2x.1 | 8k4n.1 | 8pok.1 | 8s2t.1 | 8u26.1 | 8utd.1 | 8uuj.1 | 8x16.1 | 8x17.1 | 8xbe.1 | 8xbh.1 | 8xgm.1 | 8xyd.1 | 8zbe.1 | 8zcj.1 | 8zwg.1 | 9bi6.1 | 9bip.1 | 9j5v.1