SMTL ID : 9m0r.1

Structure of neuropeptide FF receptor 1 complex with NPVF

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 2.47 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x VAL- PRO- ASN- LEU- PRO- GLN- ARG- PHE- NH2: neuropeptide VF(Non-covalent)

VAL-PRO-ASN-LEU-PRO-GLN-ARG-PHE-NH2.1: 17 residues within 4Å: Chain D: T.100, D.103, N.104, Q.123, G.124, V.127, S.202, C.203, W.204, E.205, T.217, W.287, L.290, T.307, F.311, H.315, F.319 11 PLIP interactions: 11 interactions with chain D Hydrophobic interactions: D:V.127, D:W.204, D:W.287, D:W.287, D:L.290, D:T.307, D:F.311 Hydrogen bonds: D:T.100, D:Q.123, D:T.217 Salt bridges: D:E.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, X.Z. et al., Structural basis of peptide recognition and modulation for neuropeptide FF receptors. To Be Published

Release Date

2025-07-23

Peptides

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: B
Guanine nucleotide-binding protein G(i) subunit alpha-1: C
Neuropeptide FF receptor 1: D
scFv16: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
G

C
A

D
R

E
S

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Guanine nucleotide-binding protein G(i) subunit alpha-1

Neuropeptide FF receptor 1

scFv16

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