SMTL ID : 9m54.1

Cryo-EM structure of neuropeptide FF receptor 2 complex with NPVF

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.24 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x PRO- ASN- LEU- PRO- GLN- ARG- PHE- NH2: Neuropeptide VF(Non-covalent)

PRO-ASN-LEU-PRO-GLN-ARG-PHE-NH2.1: 15 residues within 4Å: Chain A: D.105, Q.125, G.126, V.129, M.175, E.187, W.205, C.206, R.207, W.287, W.291, M.294, N.311, Y.315, H.319 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.129, A:W.205, A:W.287, A:W.291, A:Y.315 Hydrogen bonds: A:D.105, A:D.105, A:Q.125, A:Q.125, A:E.187, A:R.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, X.Z. et al., Structural basis of peptide recognition and modulation for neuropeptide FF receptors. To Be Published

Release Date

2025-07-23

Peptides

Neuropeptide FF receptor 2: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Guanine nucleotide-binding protein G(i) subunit alpha-1: D
scfv16: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
B

C
G

D
A

E
S

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Neuropeptide FF receptor 2

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Guanine nucleotide-binding protein G(i) subunit alpha-1

scfv16

Related Entries With Identical Sequence