SMTL ID : 9j78.1

Cryo-EM structure of CRL2-FEM1B (dimer 2)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-mer

Ligands

2 x UNK- UNK- UNK- UNK- UNK- UNK- UNK- UNK- UNK: Poly-UNK(Non-covalent)

UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK.1: 5 residues within 4Å: Chain E: R.264, H.345, A.352, D.356, F.501 4 PLIP interactions: 4 interactions with chain E Hydrophobic interactions: E:F.501 Hydrogen bonds: E:R.264, E:D.356, E:D.356 UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK.2: 4 residues within 4Å: Chain F: R.264, A.352, D.356, F.501 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:R.264, F:R.264, F:D.356, F:D.356

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., TOM20-Driven E3 Ligase Recruitment Regulates Mitochondrial Dynamics Through PLD6. Nat.Chem.Biol. (2025)

Release Date

2025-04-09

Peptides

Elongin-B: AD
Cullin-2: BG
Elongin-C: CH
Protein fem-1 homolog B: EF
E3 ubiquitin-protein ligase RBX1, N-terminally processed: IJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

D
D

B
B

G
A

C
C

H
G

E
J

F
F

I
E

J
I

Elongin-B

Cullin-2

Elongin-C

Protein fem-1 homolog B

E3 ubiquitin-protein ligase RBX1, N-terminally processed

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