| RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P02281; P06897; P13984; P20226; P35269; P52655; P52657; P60899; P62799; P84233; Q00403; | 20-127 | 100.0 | 9×ZN; 1×MG; |
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| Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×MG; 1×W0F; |
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| Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×MG; 1×W0F; |
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| Structural insights into human co-transcriptional capping - structure 5 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P11414; P60899; Q8N1G2; | 46-127 | 100 | 1×MG; 8×ZN; |
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| Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×MG; 1×W0F; |
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| Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×MG; 1×W0F; |
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| De novo transcribing complex 16 (TC16), the early elongation complex with Pol II positioned 16nt do… | |
Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| Structural insights into human co-transcriptional capping - structure 2 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O60942; P60899; | 46-127 | 100 | 8×ZN; 1×MG; |
|
| human co-transcriptional RNA capping enzyme RNGTT | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P18615; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; | 46-127 | 100 | 1×MG; 8×ZN; 1×GTP; |
|
| Structural insights into human co-transcriptional capping - structure 1 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A7M4DUC2; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O60942; P60899; | 46-127 | 100 | 1×MG; 8×ZN; |
|
| RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P29083; P29084; P35269; P60899; | 46-127 | 100 | 9×ZN; 1×MG; |
|
| Pol II-CSB-CSA-DDB1-ELOF1 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1B522; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q03468; Q13216; Q16531; | 46-127 | 100 | 9×ZN; 1×MG; |
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| Structural insights into human co-transcriptional capping - structure 6 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P63272; Q8N1G2; | 46-127 | 98.78 | 1×MGT; 8×ZN; 1×MG; 1×SAM; |
|
| Structure of mammalian Pol II-TFIIS elongation complex | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A7M4DUC2; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P23193; P60899; | 46-127 | 98.78 | 11×ZN; 3×MG; |
|
| human co-transcriptional RNA capping enzyme RNGTT-CMTR1 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P60899; P63272; Q8N1G2; | 46-127 | 100 | 1×MG; 8×ZN; 1×GTP; |
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| Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×W0F; 1×MG; |
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| Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×MG; 1×W0F; |
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| Structural insights into human co-transcriptional capping - structure 3 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P60899; P63272; | 46-127 | 100 | 3×ZN; 1×MG; |
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| Structural insights into human co-transcriptional capping - structure 4 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P60899; P63272; | 46-127 | 100 | 1×ZN; |
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| Structure of the Pol II-TCR-ELOF1 complex. | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1B522; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q03468; Q13216; Q16531; Q2YD98; | 46-127 | 100 | 10×ZN; 2×MG; 1×ADP; 1×BEF; |
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| Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×W0F; 1×MG; |
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| Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positione… | |
Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 46-127 | 100 | 17×ZN; 1×SF4; 1×MG; 1×W0F; |
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| Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4) | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VM56; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; P62878; Q03468; Q13216; Q13619; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q9GZS3; | 46-127 | 100 | 8×ZN; 1×MG; |
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| Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; O00267; P60899; P63272; Q6PD62; Q7KZ85; Q9GZS3; | 46-127 | 100 | 9×ZN; 1×MG; |
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| Pol II-CSB-CSA-DDB1-UVSSA (Structure1) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; Q03468; Q13216; Q16531; Q2YD98; | 46-127 | 100 | 8×ZN; 1×MG; |
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| Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; Q03468; Q13216; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q9GZS3; | 46-127 | 100 | 8×ZN; 1×MG; |
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| Structure of paused transcription complex Pol II-DSIF-NELF | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; O00267; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; | 46-127 | 100 | 1×MG; 9×ZN; |
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| Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; P62878; Q03468; Q13216; Q13619; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q9GZS3; | 46-127 | 100 | 8×ZN; 1×MG; |
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| Structure of mammalian RNA polymerase II elongation complex inhibited by Alpha-amanitin | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; |
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| Structure of a transcribing RNA polymerase II-U1 snRNP complex | |
Heteromer A0A0B8RVL1; A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LSI7; P08621; P09012; P11414; P60899; P62304; P62306; P62308; P62314; P62316; P62318; Q66K91; | 46-127 | 100 | 8×ZN; 1×MG; |
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| Pol II-CSB-CSA-DDB1-UVSSA-ADPBeF3 (Structure2) | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VM56; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; Q03468; Q13216; Q16531; | 46-127 | 100 | 8×ZN; 2×MG; 1×ADP; 1×BEF; |
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| De novo transcribing complex 12 (TC12), the early elongation complex with Pol II positioned 12nt do… | |
Heteromer A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D0JYF1; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| Structure of Pol II-TC-NER-STK19 complex | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P49842; P60002; P60899; Q03468; Q13216; Q16531; Q2YD98; Q9BW61; | 46-127 | 100 | 10×ZN; 1×MG; |
|
| PolII-TCR-STK19 structure. | |
Heteromer A0A287ADR4; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; A0A8D1KNW4; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P49842; P60002; P60899; Q03468; Q13216; Q16531; Q2YD98; | 46-127 | 100 | 11×ZN; 2×MG; 1×ADP; 1×BEF; |
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| De novo transcribing complex 13 (TC13), the early elongation complex with Pol II positioned 13nt do… | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| De novo transcribing complex 15 (TC15), the early elongation complex with Pol II positioned 15nt do… | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| De novo transcribing complex 14 (TC14), the early elongation complex with Pol II positioned 14nt do… | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| De novo transcribing complex 17 (TC17), the early elongation complex with Pol II positioned 17nt do… | |
Heteromer A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D0JYF1; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure) | |
Heteromer A0A287ADR4; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P29083; P35269; P60899; | 46-127 | 100 | 9×ZN; 1×MG; |
|
| RNA polymerase II bound to minimal Alu RNA right arm in the alternative conformation | |
Heteromer A0A0B8RVL1; A0A481DF93; A0A4X1TRS6; A0A4X1VEK9; A0A7K6NXI9; A0A8D1DPV6; F1RKE4; I3LCB2; I3LSI7; P60899; | 46-127 | 100 | 7×ZN; 1×MG; |
|
| De novo transcribing complex 11 (TC11), the early elongation complex with Pol II positioned 11nt do… | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 1×W0F; 8×ZN; 1×MG; |
|
| De novo transcribing complex 10 (TC10), the early elongation complex with Pol II positioned 10nt do… | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P35269; P60899; P85421; | 46-127 | 100 | 8×ZN; 1×MG; 1×W0F; |
|
| The structure of INTAC-PEC complex | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P24928; P30153; P60899; P63272; P67775; Q5TA45; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9UL03; | 47-127 | 100 | 10×ZN; 2×MN; 1×MG; |
|
| TFIID-based intermediate PIC on PUMA promoter | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P29083; P29084; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P02281; P06897; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; P62799; P84233; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; | 49-127 | 100 | 1×SF4; 16×ZN; 1×MG; |
|
| RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P20226; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| TFIID-based core PIC on PUMA promoter | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8; | 49-127 | 100 | 9×ZN; 1×MG; |
|
| RNA polymerase II core initially transcribing complex with an ordered RNA of 10 nt | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P20226; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| p53-bound TFIID-based core PIC on HDM2 promoter | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8; | 49-127 | 100 | 9×ZN; 1×MG; |
|
| TFIID-based intermediate PIC on SCP promoter | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P29083; P29084; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O75971; P13984; P20226; P35269; P52655; P52657; P60899; Q00403; Q16533; Q5SXM2; Q92966; | 49-127 | 100 | 11×ZN; 1×MG; |
|
| RNA Polymerase II dimer (Class 1) | |
Heteromer A0A0B8RVL1; A0A287ADR4; A0A481DF93; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LSI7; P60899; | 49-127 | 100 | 10×ZN; |
|
| RNA polymerase II core pre-initiation complex with closed promoter DNA in proximal position | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P20226; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (CC) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O75971; P13984; P20226; P35269; P52655; P52657; P60899; Q00403; Q16533; Q5SXM2; Q92966; | 49-127 | 100 | 11×ZN; 1×MG; |
|
| TFIID-based holo PIC on SCP promoter | |
Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P49848; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 49-127 | 100 | 17×ZN; 1×SF4; 1×MG; |
|
| RNA Polymerase II dimer (Class 2) | |
Heteromer A0A0B8RVL1; A0A287ADR4; A0A481DF93; A0A4X1TRS6; A0A4X1VEK9; A0A7K6NXI9; F1RKE4; I3LCB2; I3LSI7; P60899; | 49-127 | 100 | 10×ZN; |
|
| RNA polymerase II core pre-initiation complex with open promoter DNA | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P20226; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P02281; P06897; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; P62799; P84233; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; | 49-127 | 100 | 1×SF4; 17×ZN; 1×MG; |
|
| RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; | 49-127 | 100 | 1×SF4; 17×ZN; 1×MG; |
|
| Structure of SNAPc containing Pol II pre-initiation complex bound to U5 snRNA promoter (CC) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O75971; P13984; P20226; P35269; P52655; P52657; P60899; Q00403; Q16533; Q5SXM2; Q92966; | 49-127 | 100 | 11×ZN; 1×MG; |
|
| Human Mediator with RNA Polymerase II Pre-initiation complex | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; A0JLT2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O43513; O60244; O75586; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q92759; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9P086; Q9Y3C7; | 49-127 | 100 | 1×SF4; 18×ZN; 1×MG; |
|
| RNA polymerase II core pre-initiation complex with closed promoter DNA in distal position | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P20226; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| RNA Polymerase II dimer (Class 3) | |
Heteromer A0A0B8RVL1; A0A287ADR4; A0A481DF93; A0A4X1TRS6; A0A4X1VEK9; A0A7K6NXI9; F1RKE4; I3LCB2; I3LSI7; P60899; | 49-127 | 100 | 10×ZN; |
|
| RNA polymerase II pre-initiation complex with open promoter DNA | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; | 49-127 | 100 | 1×SF4; 15×ZN; 1×ADP; 2×MG; 1×BEF; |
|
| RNA polymerase II pre-initiation complex with closed promoter DNA in distal position | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P18074; P19447; P20226; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; | 49-127 | 100 | 1×SF4; 17×ZN; 1×MG; |
|
| TFIID-based core PIC on SCP promoter | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8; | 49-127 | 100 | 9×ZN; 1×MG; |
|
| p53-bound TFIID-based holo PIC on HDM2 promoter | |
Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P49848; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; | 49-127 | 100 | 16×ZN; 1×SF4; 1×MG; |
|
| RNA polymerase II core initially transcribing complex with an ordered RNA of 8 nt | |
Heteromer A0A287ADR4; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A8D0JYF1; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P20226; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; | 49-127 | 100 | 10×ZN; 1×MG; |
|
| Structure of the mammalian Pol II-SPT6 complex (composite structure, Structure 4) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q7KZ85; | 50-127 | 100 | 1×MG; 8×ZN; |
|
| Structure of the mammalian Pol II-Elongin complex, lacking the ELOA latch (composite structure, str… | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q14241; Q15369; Q15370; | 50-127 | 100 | 1×MG; 8×ZN; |
|
| Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2 | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; P60899; Q8IXW5; | 50-127 | 100 | 6×ZN; |
|
| Structure of active transcription elongation complex Pol II-DSIF (SPT5-KOW5) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; | 50-127 | 100 | 1×MG; 8×ZN; |
|
| Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome | |
Heteromer A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 50-127 | 100 | 8×ZN; 1×MG; |
|
| Structure of active transcription elongation complex Pol II-DSIF-ELL2-EAF1(composite structure) | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O00472; P60899; P63272; Q96JC9; | 50-127 | 100 | 1×MG; 9×ZN; |
|
| Structure of active transcription elongation complex Pol II-DSIF (SPT5-KOW5)-ELL2-EAF1 (composite s… | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O00472; P60899; Q96JC9; | 50-127 | 100 | 1×MG; 8×ZN; |
|
| Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) | |
Heteromer A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P63272; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 50-127 | 100 | 9×ZN; 1×MG; |
|
| Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elo… | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 50-127 | 100 | 9×ZN; 1×MG; |
|
| Structural basis of Integrator-mediated transcription regulation | |
Heteromer A0A0B8RVL1; A0A287ADR4; A0A481DF93; A0A4X1TRS6; A0A4X1VEK9; A0A7K6NXI9; A0A7M4DUC2; F1RKE4; I3LCB2; I3LJR4; I3LSI7; O00267; P30153; P60899; P67775; Q5TA45; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9UL03; | 50-127 | 100 | 1×MG; 10×ZN; 2×MN; |
|
| Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex | |
Heteromer A0A287ADR4; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; A0A8J1LZU9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P62799; P63272; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 50-127 | 100 | 9×ZN; 1×MG; |
|
| Structure of Integrator-PP2A bound to a paused RNA polymerase II-DSIF-NELF-nucleosome complex | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P06899; P0C0S8; P30153; P60899; P62805; P67775; Q5TA45; Q6NXT2; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q96N11; Q96SY0; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9NVM9; Q9NVR2; Q9UL03; | 50-127 | 100 | 10×ZN; 1×MG; 2×MN; |
|
| Structure of the mammalian Pol II-SPT6-Elongin complex, lacking ELOA latch (composite structure, st… | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q14241; Q15369; Q15370; Q7KZ85; | 50-127 | 100 | 1×MG; 8×ZN; |
|
| Structure of the mammalian Pol II-SPT6-Elongin complex, Structure 1 | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q14241; Q15369; Q15370; Q7KZ85; | 50-127 | 100 | 1×MG; 8×ZN; |
|
| Structure of transcription complex Pol II-DSIF-NELF-TFIIS | |
Heteromer A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D0JYF1; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P23193; P60899; Q8IXH7; Q9H3P2; | 50-126 | 100 | 8×ZN; 1×MG; |
|
| Structure of poised transcription complex Pol II-DSIF-NELF - pre-translocated | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; | 50-126 | 100 | 8×ZN; 1×MG; |
|
| Structure of paused transcription complex Pol II-DSIF-NELF - tilted | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; | 50-126 | 100 | 9×ZN; 1×MG; |
|
| Structure of paused transcription complex Pol II-DSIF-NELF - poised post-translocated | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; | 50-126 | 100 | 8×ZN; 1×MG; |
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| Structure of paused transcription complex Pol II-DSIF-NELF - post-translocated | |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D0TE17; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; | 50-126 | 100 | 9×ZN; 1×MG; |
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| Structure of RPAP2-bound RNA polymerase II | |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; Q8IXW5; | 51-126 | 100 | 5×ZN; |
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