Q99PF4 | SWISS-MODEL Repository

Q99PF4 (CAD23_MOUSE) Mus musculus (Mouse)

Cadherin-23 UniProtKB InterPro STRING Interactive Modelling

3354 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6)

It is possible new templates exist for this target since these models were created.

Available Structures

27 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 AND PROTOCADHERIN-15 EC1- 2 FORM I	4apx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q99PJ1;	24-228	7×CA; 1×MES; 1×CL; 1×K; 1×GOL;
Assess
CRYSTAL STRUCTURE OF DEAFNESS ASSOCIATED MUTANT MOUSE CADHERIN-23 EC1- 2D124G AND PROTOCADHERIN-15 …	4aqa SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q99PJ1;	24-228	7×CA; 1×MES; 1×CL; 1×K;
Assess
CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 AND PROTOCADHERIN-15 EC1- 2, FORM I 2.2A.	4axw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q99PJ1;	24-228	7×CA; 1×MES; 1×PG4; 1×CL; 1×GOL; 1×K;
Assess
CRYSTAL STRUCTURE OF DEAFNESS ASSOCIATED MUTANT MOUSE CADHERIN-23 EC1- 2S70P AND PROTOCADHERIN-15 E…	4aqe SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q99PJ1;	24-228	7×CA; 1×MES; 1×K;
Assess
CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 AND PROTOCADHERIN-15 EC1- 2 FORM II	4aq8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q99PJ1;	24-228	7×CA;
Assess
Crystal structure of mouse Cadherin-23 EC1-2 and Protocadherin-15 EC1-2 splice variant	4xxw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q99PJ1;	24-227	7×CA; 1×CL;
Assess
Crystal Structure of Human Protocadherin-15 EC1-3 G16D N369D Q370N and Mouse Cadherin-23 EC1-2 T15E	6n2e SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q96QU1;	25-221	18×CA;
Assess
Crystal Structure of Mouse Cadherin-23 EC19-21 S2064P	5i8d SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1952-2286	7×CA;
Assess
Crystal Structure of Mouse Cadherin-23 EC19-21 WT	5tfk SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1952-2286	8×CA;
Assess
Crystal Structure of Mouse Cadherin-23 EC19-21 with non-syndromic deafness (DFNB12) associated muta…	5un2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1955-2288	8×CA; 2×K;
Assess
Crystal Structure of Mouse Cadherin-23 EC19-21 (S2087P) with non-syndromic deafness (DFNB12) associ…	5ulu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1957-2285	6×CA;
Assess
Crystal Structure of Mouse Cadherin-23 EC22-24	5uz8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2288-2604	3×CL; 7×CA; 1×GSH;
Assess
Crystal Structure of Mouse Cadherin-23 EC13-15	7u71 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1311-1624	6×CA; 1×ACT;
Assess
Crystal Structure of Mouse Cadherin-23 EC25-26	7suu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2604-2841	6×CA; 1×K; 1×CL;
Assess
Crystal Structure of Mouse Cadherin-23 EC7+8	5tfl SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	668-884	1×NA; 2×CA;
Assess
Crystal Structure of Mouse Cadherin-23 EC18-19	7t80 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1847-2062	3×CA; 1×CL;
Assess
Crystal Structure of Mouse Cadherin-23 EC17-18	5wjm SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1739-1954	6×CA; 1×K; 2×MPD;
Assess
Crystal Structure of Mouse Cadherin-23 EC8-9	7t3s SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	770-985	3×CA; 1×NA;
Assess
Crystal Structure of Mouse Cadherin-23 EC16-17	7skh SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1631-1845	3×CA;
Assess
Crystal Structure of Mouse Cadherin-23 EC24-25	5vt8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2504-2715	2×CA;
Assess
Structure of the N-terminus of Cadherin 23	3mvs SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	24-233	6×CA; 22×EDO;
Assess
Crystal Structure of Mouse Cadherin-23 EC12-13 with Engineered Mutation S1339D	5vh2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1202-1410	3×CA; 1×NA;
Assess
CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2	2wcp SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	24-228	3×CA; 3×NA; 1×CL; 2×GOL;
Assess
CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 (ALL CATION BINDING SITES OCCUPIED BY CALCIUM)	2whv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	24-228	4×CA; 4×K; 1×CL; 1×GOL;
Assess
CRYSTAL STRUCTURE OF NONSYNDROMIC DEAFNESS (DFNB12) ASSOCIATED MUTANT D124G OF MOUSE CADHERIN-23 EC…	2wd0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	24-228	3×CA; 1×NA; 2×CL;
Assess
Crystal Structure of Mouse Cadherin-23 EC9	7uqu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	883-987	1×CA;
Assess
Crystal structure of mouse cadherin-23 EC1	2wbx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	24-124	1×CA;
Assess

14 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
6vg4.1.A	monomer	0.58	999-1626	2×CA;	29.32
Assess
6vg4.1.A	monomer	0.57	1166-1721	2×CA;	34.88
Assess
6vg4.1.A	monomer	0.57	894-1519	1×CA;	27.64
Assess
6vg4.1.A	monomer	0.57	565-1200	2×CA;	29.17
Assess
6vg1.1.A	monomer	0.56	894-1518	1×CA;	29.30
Assess
6vg1.1.A	monomer	0.56	565-1199	2×CA;	27.54
Assess
6vg4.1.A	monomer	0.54	1513-2061	3×CA;	33.90
Assess
6vg1.1.B	monomer	0.54	1135-1721	1×CA;	33.10
Assess
6e6b.1.A	monomer	0.53	675-1307	5×CA;	27.18
Assess
6vg4.1.A	monomer	0.53	1837-2394	2×CA;	33.33
Assess
6e6b.1.A	monomer	0.53	782-1412	3×CA;	25.81
Assess
6vg1.1.A	monomer	0.51	1040-1620	1×CA;	32.85
Assess
6e6b.1.A	monomer	0.51	464-1096	4×CA;	30.02
Assess
1q55.1.A	monomer	0.50	1001-1525	3×CA;	23.06
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

40 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	6vg4.1.A	monomer	0.59	999-1626	2×CA;	29.32
Assess
Isoform 2	6vg4.1.A	monomer	0.58	894-1519	1×CA;	27.64
Assess
Isoform 2	6vg4.1.A	monomer	0.57	1166-1721	2×CA;	34.88
Assess
Isoform 2	6vg1.1.A	monomer	0.57	675-1304	3×CA;	25.82
Assess
Isoform 2	6vg4.1.A	monomer	0.57	565-1200	2×CA;	29.17
Assess
Isoform 2	6vg1.1.A	monomer	0.57	894-1518	1×CA;	29.30
Assess
Isoform 2	6vg4.1.A	monomer	0.56	675-1305	5×CA;	26.47
Assess
Isoform 2	6vg1.1.A	monomer	0.56	565-1199	2×CA;	27.54
Assess
Isoform 2	6vg1.1.A	monomer	0.56	1135-1721	1×CA;	33.10
Assess
Isoform 2	6vg4.1.A	monomer	0.54	1513-2061	3×CA;	33.90
Assess
Isoform 2	6e6b.1.A	monomer	0.53	782-1412	3×CA;	25.81
Assess
Isoform 2	6vg4.1.A	monomer	0.52	1837-2394	2×CA;	33.33
Assess
Isoform 2	6e6b.1.A	monomer	0.51	464-1096	4×CA;	30.02
Assess
Isoform 2	6vg1.1.B	monomer	0.51	1040-1620	1×CA;	32.85
Assess
Isoform 2	1q55.1.A	monomer	0.50	1001-1525	3×CA;	23.06
Assess
Isoform 4	6vg4.1.A	monomer	0.58	166-712	1×CA;	26.72
Assess
Isoform 4	6e6b.1.A	homo-2-mer	0.56	60-714	6×CA;	26.39
Assess
Isoform 4	3q2w.1.B	homo-2-mer	0.55	61-597	5×CA;	26.95
Assess
Isoform 4	7a7d.1.H	monomer	0.54	168-712		22.18
Assess
Isoform 4	3q2w.1.B	homo-2-mer	0.54	167-711	2×CA;	24.95
Assess
Isoform 4	7a7d.1.A	monomer	0.53	59-607		23.18
Assess
Isoform 4	6c13.1.A	homo-2-mer	0.53	266-813		22.80
Assess
Isoform 4	7a7d.1.D	monomer	0.52	59-607		23.18
Assess
Isoform 4	5erd.1.A	homo-2-mer	0.52	162-712		23.35
Assess
Isoform 4	7a7d.1.E	monomer	0.52	162-712		23.31
Assess
Isoform 4	7a7d.1.A	monomer	0.51	162-712		23.31
Assess
Isoform 4	7a7d.1.D	monomer	0.51	162-712		23.31
Assess
Isoform 5	6vg4.1.A	monomer	0.57	165-712	1×CA;	26.67
Assess
Isoform 5	6e6b.1.A	homo-2-mer	0.56	60-714	6×CA;	26.39
Assess
Isoform 5	3q2w.1.B	homo-2-mer	0.55	61-597	6×CA;	26.95
Assess
Isoform 5	7a7d.1.H	monomer	0.53	168-713		22.13
Assess
Isoform 5	3q2w.1.B	homo-2-mer	0.53	167-711	2×CA;	24.90
Assess
Isoform 5	7a7d.1.A	monomer	0.53	59-607		23.18
Assess
Isoform 5	6c13.1.A	homo-2-mer	0.53	266-813		22.80
Assess
Isoform 5	5erd.1.A	homo-2-mer	0.52	162-712		23.35
Assess
Isoform 5	7a7d.1.D	monomer	0.52	59-607		23.18
Assess
Isoform 5	7a7d.1.E	monomer	0.52	162-712		23.31
Assess
Isoform 5	7a7d.1.A	monomer	0.51	162-712		23.31
Assess
Isoform 5	7a7d.1.D	monomer	0.51	162-712		23.31
Assess
Isoform 5	6vg1.1.A	homo-2-mer	0.50	146-665	1×CA;	32.79
Assess

Q99PF4 (CAD23_MOUSE) Mus musculus (Mouse)

Cadherin-23 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

27 Experimental Structures

14 SWISS-MODEL models

40 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Cadherin-23 UniProtKB InterPro STRING Interactive Modelling