SMTL ID : 1ar7.2 (3 other biounits)

P1/MAHONEY POLIOVIRUS, DOUBLE MUTANT P1095S + H2142Y

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-5-5-5-5-mer

Ligands

5 x GLY- SER- SER- SER- THR: P1/MAHONEY POLIOVIRUS(Non-covalent)

GLY-SER-SER-SER-THR.1: 9 residues within 4Å: Chain D: G.1, A.2, Q.3, V.4, S.5, S.6, Q.43 Ligands: MYR.3, MYR.15 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:A.2, D:A.2, D:Q.3, D:V.4, D:V.4, D:V.4, D:S.6 GLY-SER-SER-SER-THR.4: 9 residues within 4Å: Chain H: G.1, A.2, Q.3, V.4, S.5, S.6, Q.43 Ligands: MYR.3, MYR.6 7 PLIP interactions: 7 interactions with chain H Hydrogen bonds: H:A.2, H:A.2, H:Q.3, H:V.4, H:V.4, H:S.5, H:S.6 GLY-SER-SER-SER-THR.7: 9 residues within 4Å: Chain L: G.1, A.2, Q.3, V.4, S.5, S.6, Q.43 Ligands: MYR.6, MYR.9 7 PLIP interactions: 7 interactions with chain L Hydrogen bonds: L:A.2, L:A.2, L:Q.3, L:V.4, L:V.4, L:V.4, L:S.6 GLY-SER-SER-SER-THR.10: 9 residues within 4Å: Chain P: G.1, A.2, Q.3, V.4, S.5, S.6, Q.43 Ligands: MYR.9, MYR.12 7 PLIP interactions: 7 interactions with chain P Hydrogen bonds: P:A.2, P:A.2, P:Q.3, P:V.4, P:V.4, P:V.4, P:S.6 GLY-SER-SER-SER-THR.13: 9 residues within 4Å: Chain T: G.1, A.2, Q.3, V.4, S.5, S.6, Q.43 Ligands: MYR.12, MYR.15 7 PLIP interactions: 7 interactions with chain T Hydrogen bonds: T:A.2, T:A.2, T:Q.3, T:V.4, T:V.4, T:V.4, T:S.6

5 x SPH: SPHINGOSINE(Non-covalent)

SPH.2: 15 residues within 4Å: Chain A: I.110, Y.112, M.132, L.134, Y.159, P.181, I.183, I.194, V.196, V.199, Y.205, S.206, D.236, F.237, L.240 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:I.110, A:Y.112, A:Y.112, A:L.134, A:Y.159, A:Y.159, A:Y.159, A:I.183, A:I.194, A:V.196, A:V.199, A:F.237, A:F.237, A:L.240 Hydrogen bonds: A:Y.112, A:S.206, A:S.206 Water bridges: A:K.113, A:H.207 SPH.5: 15 residues within 4Å: Chain E: I.110, Y.112, M.132, L.134, Y.159, P.181, I.183, I.194, V.196, V.199, Y.205, S.206, D.236, F.237, L.240 19 PLIP interactions: 19 interactions with chain E Hydrophobic interactions: E:I.110, E:Y.112, E:Y.112, E:L.134, E:Y.159, E:Y.159, E:Y.159, E:I.183, E:I.194, E:V.196, E:V.199, E:F.237, E:F.237, E:L.240 Hydrogen bonds: E:Y.112, E:S.206, E:S.206 Water bridges: E:K.113, E:H.207 SPH.8: 15 residues within 4Å: Chain I: I.110, Y.112, M.132, L.134, Y.159, P.181, I.183, I.194, V.196, V.199, Y.205, S.206, D.236, F.237, L.240 19 PLIP interactions: 19 interactions with chain I Hydrophobic interactions: I:I.110, I:Y.112, I:Y.112, I:L.134, I:Y.159, I:Y.159, I:Y.159, I:I.183, I:I.194, I:V.196, I:V.199, I:F.237, I:F.237, I:L.240 Hydrogen bonds: I:Y.112, I:S.206, I:S.206 Water bridges: I:K.113, I:H.207 SPH.11: 15 residues within 4Å: Chain M: I.110, Y.112, M.132, L.134, Y.159, P.181, I.183, I.194, V.196, V.199, Y.205, S.206, D.236, F.237, L.240 19 PLIP interactions: 19 interactions with chain M Hydrophobic interactions: M:I.110, M:Y.112, M:Y.112, M:L.134, M:Y.159, M:Y.159, M:Y.159, M:I.183, M:I.194, M:V.196, M:V.199, M:F.237, M:F.237, M:L.240 Hydrogen bonds: M:Y.112, M:S.206, M:S.206 Water bridges: M:K.113, M:H.207 SPH.14: 15 residues within 4Å: Chain Q: I.110, Y.112, M.132, L.134, Y.159, P.181, I.183, I.194, V.196, V.199, Y.205, S.206, D.236, F.237, L.240 19 PLIP interactions: 19 interactions with chain Q Hydrophobic interactions: Q:I.110, Q:Y.112, Q:Y.112, Q:L.134, Q:Y.159, Q:Y.159, Q:Y.159, Q:I.183, Q:I.194, Q:V.196, Q:V.199, Q:F.237, Q:F.237, Q:L.240 Hydrogen bonds: Q:Y.112, Q:S.206, Q:S.206 Water bridges: Q:K.113, Q:H.207

5 x MYR: MYRISTIC ACID(Covalent)

MYR.3: 14 residues within 4Å: Chain D: G.1, A.2, I.29, Y.31 Chain H: V.4, T.27, T.28, I.29, Y.31 Chain O: L.2 Ligands: GLY-SER-SER-SER-THR.1, GLY-SER-SER-SER-THR.4, MYR.6, MYR.15 5 PLIP interactions: 1 interactions with chain O, 2 interactions with chain H, 2 interactions with chain D Hydrophobic interactions: O:L.2, H:I.29, D:I.29, D:Y.31 Hydrogen bonds: H:T.27 MYR.6: 14 residues within 4Å: Chain H: G.1, A.2, I.29, Y.31 Chain L: V.4, T.27, T.28, I.29, Y.31 Chain S: L.2 Ligands: MYR.3, GLY-SER-SER-SER-THR.4, GLY-SER-SER-SER-THR.7, MYR.9 4 PLIP interactions: 1 interactions with chain S, 2 interactions with chain H, 1 interactions with chain L Hydrophobic interactions: S:L.2, H:I.29, H:Y.31, L:I.29 MYR.9: 14 residues within 4Å: Chain C: L.2 Chain L: G.1, A.2, I.29, Y.31 Chain P: V.4, T.27, T.28, I.29, Y.31 Ligands: MYR.6, GLY-SER-SER-SER-THR.7, GLY-SER-SER-SER-THR.10, MYR.12 4 PLIP interactions: 1 interactions with chain C, 2 interactions with chain L, 1 interactions with chain P Hydrophobic interactions: C:L.2, L:I.29, L:Y.31, P:I.29 MYR.12: 14 residues within 4Å: Chain G: L.2 Chain P: G.1, A.2, I.29, Y.31 Chain T: V.4, T.27, T.28, I.29, Y.31 Ligands: MYR.9, GLY-SER-SER-SER-THR.10, GLY-SER-SER-SER-THR.13, MYR.15 5 PLIP interactions: 2 interactions with chain T, 1 interactions with chain G, 2 interactions with chain P Hydrophobic interactions: T:I.29, G:L.2, P:I.29, P:Y.31 Hydrogen bonds: T:T.27 MYR.15: 14 residues within 4Å: Chain D: V.4, T.27, T.28, I.29, Y.31 Chain K: L.2 Chain T: G.1, A.2, I.29, Y.31 Ligands: GLY-SER-SER-SER-THR.1, MYR.3, MYR.12, GLY-SER-SER-SER-THR.13 5 PLIP interactions: 2 interactions with chain D, 2 interactions with chain T, 1 interactions with chain K Hydrophobic interactions: D:I.29, T:I.29, T:Y.31, K:L.2 Hydrogen bonds: D:T.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wien, M.W. et al., Structural studies of poliovirus mutants that overcome receptor defects. Nat.Struct.Biol. (1997)

Release Date

1997-12-03

Peptides

P1/MAHONEY POLIOVIRUS: AEIMQ
P1/MAHONEY POLIOVIRUS: BFJNR
P1/MAHONEY POLIOVIRUS: CGKOS
P1/MAHONEY POLIOVIRUS: DHLPT

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

B
2

F
2

J
2

N
2

R
2

C
3

G
3

K
3

O
3

S
3

D
4

H
4

L
4

P
4

T
4

P1/MAHONEY POLIOVIRUS

P1/MAHONEY POLIOVIRUS

P1/MAHONEY POLIOVIRUS

P1/MAHONEY POLIOVIRUS

Related Entries With Identical Sequence