SMTL ID : 1pov.4 (3 other biounits)

ROLE AND MECHANISM OF THE MATURATION CLEAVAGE OF VP0 IN POLIOVIRUS ASSEMBLY: STRUCTURE OF THE EMPTY CAPSID ASSEMBLY INTERMEDIATE AT 2.9 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x MYR: MYRISTIC ACID(Covalent)

MYR.1: 3 residues within 4Å: Chain A: G.1, A.2, Y.31 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.31

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.2: 13 residues within 4Å: Chain B: Y.112, M.132, L.134, Y.159, P.181, I.183, I.194, V.196, V.199, Y.205, S.206, D.236, F.237 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:Y.112, B:L.134, B:Y.159, B:Y.159, B:Y.159, B:I.183, B:I.194, B:V.196, B:V.196, B:V.199, B:Y.205, B:F.237, B:F.237, B:F.237, B:F.237 Hydrogen bonds: B:S.206, B:S.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basavappa, R. et al., Role and mechanism of the maturation cleavage of VP0 in poliovirus assembly: structure of the empty capsid assembly intermediate at 2.9 A resolution. Protein Sci. (1994)

Release Date

1995-12-07

Peptides

POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1): A
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1): B
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1): C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
0

B
1

C
3

POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1)

POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1)

POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1)

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