SMTL ID : 1dq2.1

Unlocked metal-free concanavalin A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-tetramer

Ligands

4 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 7 residues within 4Å: Chain A: F.130, Q.137, D.139 Chain B: W.88, N.124, A.125, H.180 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:N.124, A:Q.137, A:D.139 Water bridges: B:H.180, B:H.180 Salt bridges: B:H.180 Hydrophobic interactions: A:F.130 ACY.2: 7 residues within 4Å: Chain A: W.88, N.124, A.125 Chain B: M.129, F.130, Q.137, D.139 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:F.130 Hydrogen bonds: B:Q.137, B:D.139, A:N.124 Water bridges: A:H.180 Salt bridges: A:H.180 ACY.3: 7 residues within 4Å: Chain C: F.130, Q.137, D.139 Chain D: W.88, N.124, A.125, H.180 7 PLIP interactions: 3 interactions with chain C, 4 interactions with chain D Hydrophobic interactions: C:F.130 Hydrogen bonds: C:Q.137, C:D.139, D:N.124 Water bridges: D:H.180, D:H.180 Salt bridges: D:H.180 ACY.4: 7 residues within 4Å: Chain C: W.88, N.124, A.125 Chain D: M.129, F.130, Q.137, D.139 6 PLIP interactions: 3 interactions with chain D, 3 interactions with chain C Hydrophobic interactions: D:F.130 Hydrogen bonds: D:Q.137, D:D.139, C:N.124 Water bridges: C:H.180 Salt bridges: C:H.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bouckaert, J. et al., The structural features of concanavalin A governing non-proline peptide isomerization. J.Biol.Chem. (2000)

Release Date

2000-01-19

Peptides

Concanavalin-Br: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Concanavalin-Br

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