SMTL ID : 1g35.1

CRYSTAL STRUCTURE OF HIV-1 PROTEASE IN COMPLEX WITH INHIBITOR, AHA024

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x AHF: 2-[4-(HYDROXY-METHOXY-METHYL)-BENZYL]-7-(4-HYDROXYMETHYL-BENZYL)-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1LAMBDA6-[1,2,7]THIADIAZEPANE-4,5-DIOL(Non-covalent)

AHF.1: 24 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, D.30, G.48, G.49, I.50, P.81, V.82 Chain B: R.8, L.23, D.25, G.27, A.28, D.30, V.32, I.47, G.48, G.49, I.50, P.81, I.84 22 PLIP interactions: 12 interactions with chain A, 10 interactions with chain B Hydrophobic interactions: A:A.28, A:P.81, A:V.82, B:L.23, B:A.28, B:D.30, B:V.32, B:I.47, B:P.81 Hydrogen bonds: A:D.25, A:D.29, A:D.30, A:D.30, A:I.50, B:G.27, B:I.50 Water bridges: A:R.8, B:R.8 Salt bridges: A:R.8, A:D.25, A:D.25, B:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schaal, W. et al., Synthesis and comparative molecular field analysis (CoMFA) of symmetric and nonsymmetric cyclic sulfamide HIV-1 protease inhibitors. J.Med.Chem. (2001)

Release Date

2001-06-06

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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