SMTL ID : 2bpy.1

HIV-1 protease-inhibitor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

1 x 3IN: N-[2(S)-CYCLOPENTYL-1(R)-HYDROXY-3(R)METHYL]-5-[(2(S)-TERTIARY-BUTYLAMINO-CARBONYL)-4-(N1-(2)-(N-METHYLPIPERAZINYL)-3-CHLORO-PYRAZINYL-5-CARBONYL)-PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYL-PENTANAMIDE(Non-covalent)

3IN.1: 24 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, D.30, I.47, G.48, G.49, I.50, F.53, P.81, V.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.29, G.48, G.49, I.50, P.81, V.82, I.84 18 PLIP interactions: 10 interactions with chain A, 8 interactions with chain B Hydrophobic interactions: A:L.23, A:I.47, A:P.81, A:V.82, A:I.84, B:A.28 Water bridges: A:G.27, A:D.29, A:G.48, A:I.50 Salt bridges: A:D.25, B:D.25 Hydrogen bonds: B:R.8, B:D.25, B:G.27, B:G.27, B:D.29, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Munshi, S. et al., Rapid X-ray diffraction analysis of HIV-1 protease-inhibitor complexes: inhibitor exchange in single crystals of the bound enzyme. Acta Crystallogr.,Sect.D (1998)

Release Date

1999-02-23

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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