SMTL ID : 1zsf.1

Crystal Structure of Complex of a Hydroxyethylamine Inhibitor with HIV-1 Protease at 2.0A Resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-dimer

Ligands

1 x 0ZS: N-{(2R,3S)-3-[(TERT-BUTOXYCARBONYL)AMINO]-2-HYDROXY-4-PHENYLBUTYL}-L-PHENYLALANYL-L-ALPHA-GLUTAMYL-L-PHENYLALANINAMIDE(Non-covalent)

0ZS.1: 27 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.30, V.32, G.48, G.49, I.50, P.81, V.82, I.84 24 PLIP interactions: 10 interactions with chain B, 14 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:D.30, B:V.32, B:V.82, B:V.82, B:I.84, A:L.23, A:A.28, A:I.50, A:P.81, A:V.82, A:V.82 Hydrogen bonds: B:D.25, B:G.27, A:G.27, A:D.29, A:D.29, A:D.30, A:D.30, A:G.48, A:G.48 Water bridges: B:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Duskova, J. et al., On the role of the R configuration of the reaction-intermediate isostere in HIV-1 protease-inhibitor binding: X-ray structure at 2.0 A resolution. Acta Crystallogr.,Sect.D (2006)

Release Date

2006-04-25

Peptides

PROTEASE RETROPEPSIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE RETROPEPSIN

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