SMTL ID : 3jbe.4 (3 other biounits)

Complex of poliovirus with VHH PVSS8A

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 4.20 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 15 residues within 4Å: Chain A: I.110, Y.112, F.130, M.132, L.134, Y.159, I.194, V.196, V.199, Y.205, S.206, H.207, N.235, F.237, L.240 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:I.110, A:I.110, A:Y.112, A:Y.112, A:F.130, A:Y.159, A:Y.159, A:Y.159, A:I.194, A:V.196, A:V.199, A:Y.205, A:Y.205, A:Y.205, A:N.235, A:F.237, A:F.237, A:F.237, A:F.237, A:L.240 Hydrogen bonds: A:Y.112, A:S.206 Salt bridges: A:H.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Strauss, M. et al., Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site. J.Virol. (2016)

Release Date

2016-01-27

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D
nanobody VHH PVSS8A: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

E
7

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

nanobody VHH PVSS8A

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