SMTL ID : 1w51.1

BACE (Beta Secretase) in complex with a nanomolar non-peptidic inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

4 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 3 residues within 4Å: Chain A: T.122, E.123, S.124 Ligand excluded by PLIP IOD.2: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.3: 1 residues within 4Å: Chain A: K.126 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: R.115 Ligand excluded by PLIP

1 x L01: 3-[({(1S,2R)-1-BENZYL-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}AMINO)(HYDROXY)METHYL]-N,N-DIPROPYLBENZAMIDE(Non-covalent)

L01.5: 21 residues within 4Å: Chain A: G.30, Q.31, G.32, L.49, D.51, G.53, S.54, P.89, Y.90, T.91, Q.92, F.127, I.137, I.145, R.147, Y.217, D.247, G.249, T.250, T.251, R.254 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.49, A:Y.90, A:T.91, A:Q.92, A:Q.92, A:F.127, A:I.137, A:Y.217 Hydrogen bonds: A:D.51, A:T.91, A:Q.92, A:D.247, A:G.249, A:T.250, A:T.251 Water bridges: A:T.91, A:R.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, S. et al., Apo and Inhibitor Complex Structures of Bace (Beta-Secretase). J.Mol.Biol. (2004)

Release Date

2004-09-23

Peptides

BETA-SECRETASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-SECRETASE 1

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