SMTL ID : 4acx.1

Aminoimidazoles as BACE-1 Inhibitors. X-RAY CRYSTAL STRUCTURE OF BETA SECRETASE COMPLEXED WITH COMPOUND 23

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: G.53, Y.217 Ligands: S8Z.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.217 Water bridges: A:Y.217

1 x S8Z: (8R)-8-[4-(DIFLUOROMETHOXY)PHENYL]-3,3-DIFLUORO-8-[3-(3-METHOXYPROP-1-YN-1-YL)PHENYL]-2,3,4,8-TETRAHYDROIMIDAZO[1,5-A]PYRIMIDIN-6-AMINE(Non-covalent)

S8Z.2: 24 residues within 4Å: Chain A: S.29, G.30, Q.31, G.32, L.49, D.51, G.53, S.54, N.56, V.88, Y.90, Q.92, W.95, F.127, I.129, W.134, I.137, R.147, D.247, S.248, G.249, T.250, T.251 Ligands: ACT.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.49, A:Y.90, A:Y.90, A:F.127, A:I.129, A:W.134, A:I.137 Hydrogen bonds: A:T.251 Water bridges: A:T.251 Salt bridges: A:D.51, A:D.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Swahn, B.M. et al., Aminoimidazoles as BACE-1 inhibitors: the challenge to achieve in vivo brain efficacy. Bioorg. Med. Chem. Lett. (2012)

Release Date

2012-02-29

Peptides

BETA-SECRETASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-SECRETASE 1

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