SMTL ID : 3q3t.1 (1 other biounit)

Alkyl Amine Renin Inhibitors: Filling S1 from S3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: H.74, N.75, R.139 No protein-ligand interaction detected (PLIP)

1 x RX0: [(1S,3R,4S)-3-amino-4-hydroxycyclopentyl]{(3R)-3-[(1S)-1-(biphenyl-2-yl)-1-hydroxy-5-methoxypentyl]piperidin-1-yl}methanone(Non-covalent)

RX0.2: 19 residues within 4Å: Chain A: T.18, Q.19, Y.20, V.36, D.38, G.40, Y.83, S.84, T.85, P.118, A.122, F.124, Y.162, D.226, T.227, G.228, A.229, S.230, M.303 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Q.19, A:V.36, A:T.85, A:A.122, A:F.124 Hydrogen bonds: A:Y.20, A:D.38, A:S.84 pi-Stacking: A:Y.83

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: S.291, S.292 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.292 GOL.4: 4 residues within 4Å: Chain A: K.50, H.74, G.76, F.91 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.50, A:G.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yuan, J. et al., Biphenyl/diphenyl ether renin inhibitors: Filling the S1 pocket of renin via the S3 pocket. Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-08-03

Peptides

Renin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Renin

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