SMTL ID : 4j04.2 (1 other biounit)

Crystal structure of hcv ns5b polymerase in complex with 4-CHLORO-2-{[(2,4,5-TRICHLOROPHENYL)SULFONYL]AMINO}BENZOIC ACID

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 1JF: 4-chloro-2-{[(2,4,5-trichlorophenyl)sulfonyl]amino}benzoic acid(Non-covalent)

1JF.1: 12 residues within 4Å: Chain A: V.205, W.208, K.209, D.359, L.360, E.361, V.370, S.371, V.372, R.380, Y.382 Ligands: MN.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:E.361, A:V.372, A:V.372, A:Y.382 Hydrogen bonds: A:L.360 Salt bridges: A:R.380 Halogen bonds: A:V.205

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 2 residues within 4Å: Chain A: D.359 Ligands: 1JF.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.359, H2O.5, H2O.11, H2O.11 MN.3: 2 residues within 4Å: Chain A: D.318, D.319 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.318, A:D.319, H2O.1, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stammers, T.A. et al., Discovery of a novel series of non-nucleoside thumb pocket 2 HCV NS5B polymerase inhibitors. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-04-17

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Genome polyprotein

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