SMTL ID : 4jy0.1 (1 other biounit)

Crystal structure of hcv ns5b polymerase in complex with compound 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 1O9: (4S,5R)-1-(4-tert-butylbenzoyl)-2-(2-methylpropyl)-4-pyrazin-2-yl-5-(1,3-thiazol-2-yl)-L-proline(Non-covalent)

1O9.1: 17 residues within 4Å: Chain A: P.197, R.200, C.366, S.367, S.368, L.384, R.386, R.394, S.407, G.410, N.411, M.414, Y.415, Q.446, I.447, Y.448, G.449 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.384, A:L.384, A:M.414, A:Y.415, A:Y.415, A:Y.448 Hydrogen bonds: A:R.386, A:R.394, A:Q.446, A:Y.448, A:G.449

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coulombe, R., Distinguishing drug binding pockets on proteins by complementary biophysical and biological methods. To be Published

Release Date

2014-04-23

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Genome polyprotein

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