SMTL ID : 4ybi.2 (1 other biounit)

Crystal structure of BACE with amino thiazine inhibitor LY2811376

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

monomer

Ligands

1 x 4B2: (4S)-4-[2,4-difluoro-5-(pyrimidin-5-yl)phenyl]-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine(Non-covalent)

4B2.1: 16 residues within 4Å: Chain A: S.59, G.60, Q.61, G.62, L.79, D.81, G.83, Y.120, F.157, I.159, W.164, I.167, D.277, G.279, T.280, T.281 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.120, A:F.157 Hydrogen bonds: A:D.81, A:T.281 Water bridges: A:T.281

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: F.208, G.322, D.367 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.322 Water bridges: A:G.207, A:D.367 GOL.3: 6 residues within 4Å: Chain A: T.131, R.145, N.147, E.183, S.188, Q.192 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.147, A:E.183, A:E.183, A:Q.192 Water bridges: A:R.110, A:T.131, A:N.147, A:E.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

May, P.C. et al., Robust central reduction of amyloid-beta in humans with an orally available, non-peptidic beta-secretase inhibitor. J.Neurosci. (2011)

Release Date

2015-04-01

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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