SMTL ID : 7myu.2 (1 other biounit)

BACE-1 in complex with compound #22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x ZR7: N-{3-[(4aR,7aS)-2-amino-6-(5-fluoropyrimidin-2-yl)-4a,5,6,7-tetrahydropyrrolo[3,4-d][1,3]thiazin-7a(4H)-yl]-4-fluorophenyl}-5-methoxypyrazine-2-carboxamide(Non-covalent)

ZR7.1: 24 residues within 4Å: Chain A: K.58, S.59, G.60, Q.61, G.62, Y.63, L.79, D.81, G.83, S.84, V.118, Y.120, F.157, I.159, W.164, I.167, I.175, R.177, D.277, S.278, G.279, T.280, T.281, A.384 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.79, A:Y.120, A:F.157, A:W.164, A:I.167 Hydrogen bonds: A:G.60, A:G.62, A:S.84, A:D.277, A:G.279 Water bridges: A:S.85, A:T.280

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: H.94, F.96, D.155, K.156 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.94, A:D.155, A:K.156 Water bridges: A:F.157, A:F.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McKinzie, D.L. et al., Discovery and Early Clinical Development of LY3202626, a Low-Dose, CNS-Penetrant BACE Inhibitor. J.Med.Chem. (2021)

Release Date

2021-07-21

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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