SMTL ID : 7myi.2 (1 other biounit)

BACE-1 in complex with compound #6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

monomer

Ligands

1 x ZQS: (4aR,7aR)-6-(pyrimidin-2-yl)-7a-(thiophen-2-yl)-4,4a,5,6,7,7a-hexahydropyrrolo[3,4-d][1,3]thiazin-2-amine(Non-covalent)

ZQS.1: 13 residues within 4Å: Chain A: L.79, D.81, G.83, S.84, V.118, Y.120, Q.122, F.157, I.167, R.177, D.277, G.279, T.280 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.118, A:Y.120, A:F.157, A:R.177 Hydrogen bonds: A:S.84, A:D.277

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: S.107, T.108, Y.109, R.110, R.145 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.108, A:R.110, A:R.145 GOL.3: 3 residues within 4Å: Chain A: F.208, G.322, D.367 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.322 Water bridges: A:G.207, A:D.367

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McKinzie, D.L. et al., Discovery and Early Clinical Development of LY3202626, a Low-Dose, CNS-Penetrant BACE Inhibitor. J.Med.Chem. (2021)

Release Date

2021-07-21

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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