SMTL ID : 7myr.2 (1 other biounit)

BACE-1 in complex with compound #18

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x ZRD: (4aR,7aR)-6-(5-fluoropyrimidin-2-yl)-7a-(1,2-thiazol-5-yl)-4,4a,5,6,7,7a-hexahydropyrrolo[3,4-d][1,3]thiazin-2-amine(Non-covalent)

ZRD.1: 13 residues within 4Å: Chain A: L.79, D.81, G.83, S.84, V.118, Y.120, F.157, I.167, I.175, R.177, D.277, G.279, T.280 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.120 Hydrogen bonds: A:D.81 Water bridges: A:Y.120

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: F.208, G.322, D.367 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.322 Water bridges: A:G.207, A:D.367

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: H.94, F.96, D.155, K.156 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.155, A:K.156 Water bridges: A:H.94, A:H.94, A:F.157, A:F.157 Salt bridges: A:H.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McKinzie, D.L. et al., Discovery and Early Clinical Development of LY3202626, a Low-Dose, CNS-Penetrant BACE Inhibitor. J.Med.Chem. (2021)

Release Date

2021-07-14

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

Related Entries With Identical Sequence