SMTL ID : 6bfx.2 (1 other biounit)

BACE crystal structure with hydroxy pyrrolidine inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x DKJ: N-{(1S,2S)-3-(3,5-difluorophenyl)-1-[(3R,5S,6R)-6-(2,2-dimethylpropoxy)-5-methylmorpholin-3-yl]-1-hydroxypropan-2-yl}acetamide(Non-covalent)

DKJ.1: 21 residues within 4Å: Chain A: L.79, D.81, G.83, S.84, V.118, P.119, Y.120, T.121, G.123, F.157, I.159, W.164, I.167, I.175, R.177, Y.247, I.275, D.277, G.279, T.280, V.381 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.118, A:Y.120, A:Y.120, A:I.167, A:I.175, A:Y.247, A:I.275 Hydrogen bonds: A:D.81, A:G.83, A:T.121, A:G.279 Water bridges: A:Q.122 pi-Stacking: A:Y.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bueno, A.B. et al., Optimization of Hydroxyethylamine Transition State Isosteres as Aspartic Protease Inhibitors by Exploiting Conformational Preferences. J. Med. Chem. (2017)

Release Date

2017-11-15

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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