5e7v.1 | SWISS-MODEL Template Library

SMTL ID : 5e7v.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-2-mer

Ligands

2 x M7E: 1-ALPHA-HYDROXY-27-NOR-25-O-CARBONYL-VITAMIN D3(Non-covalent)

M7E.1:	23 residues within 4Å: Chain A: Y.22, L.102, L.105, A.106, V.109, S.112, I.143, I.146, R.149, S.150, S.153, W.161, C.163, V.175, A.178, H.180, L.184, L.188, H.270, Y.274, L.277, L.287, F.295 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.109, A:I.143, A:I.146, A:W.161, A:W.161, A:V.175, A:V.175, A:L.184, A:L.188 Hydrogen bonds: A:S.112, A:R.149, A:S.153
M7E.2:	23 residues within 4Å: Chain C: Y.22, L.102, L.105, A.106, V.109, S.112, I.143, I.146, R.149, S.150, S.153, W.161, C.163, V.175, A.178, H.180, L.184, L.188, H.270, Y.274, L.277, L.287, F.295 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:V.109, C:I.143, C:I.146, C:W.161, C:W.161, C:V.175, C:V.175, C:L.184, C:L.188 Hydrogen bonds: C:Y.22, C:S.112, C:R.149, C:S.153

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Otero, R. et al., Carborane-based design of a potent vitamin D receptor agonist. Chem Sci (2016)

Release Date

2015-11-25

Peptides

Vitamin D3 receptor A: AC
Nuclear receptor coactivator 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B