SMTL ID : 5fsk.1

MTH1 substrate recognition: Complex with 8-oxo-dGTP.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

monomer

Ligands

1 x H6Y: 8-OXO-ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

H6Y.1: 18 residues within 4Å: Chain A: Y.10, L.12, K.26, F.30, G.31, N.36, G.39, G.40, K.41, E.55, E.58, E.59, F.75, M.84, W.120, D.122, D.123 Ligands: ACT.2 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:F.30, A:K.41, A:E.59, A:D.122 Water bridges: A:G.39, A:Q.43, A:R.54, A:R.54, A:E.55, A:E.59 pi-Stacking: A:W.120, A:W.120

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: L.12, N.36, G.37, D.123, W.126, F.127 Ligands: H6Y.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.127 Hydrogen bonds: A:G.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nissink, J.W.M. et al., Mth1 Substrate Recognition--an Example of Specific Promiscuity. Plos One (2016)

Release Date

2016-07-20

Peptides

7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE

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