SMTL ID : 6f1x.1 (1 other biounit)

Complex between MTH1 and compound 7 (a 7-azaindole-2-amide derivative)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x C9Q: 4-(3-chlorophenyl)-~{N}-ethyl-1~{H}-pyrrolo[2,3-b]pyridine-2-carboxamide(Non-covalent)

C9Q.1: 15 residues within 4Å: Chain A: Y.10, T.11, L.12, F.30, N.36, G.37, G.40, F.75, M.84, M.119, W.120, D.122, D.123, W.126, F.127 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.10, A:F.30, A:F.75, A:W.126, A:F.127 Hydrogen bonds: A:G.37, A:D.123, A:D.123 Water bridges: A:W.120 pi-Stacking: A:W.120, A:W.120, A:W.120 Halogen bonds: A:T.11

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: H.68, K.69 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.69 Salt bridges: A:H.68 SO4.3: 5 residues within 4Å: Chain A: A.66, H.68, T.91, D.92, S.93 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.91, A:D.92, A:S.93, A:S.93 Salt bridges: A:H.68 SO4.4: 2 residues within 4Å: Chain A: H.137, R.154 4 PLIP interactions: 4 interactions with chain A Water bridges: A:G.138, A:R.154 Salt bridges: A:H.137, A:R.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rahm, F. et al., Creation of a Novel Class of Potent and Selective MutT Homologue 1 (MTH1) Inhibitors Using Fragment-Based Screening and Structure-Based Drug Design. J. Med. Chem. (2018)

Release Date

2018-03-07

Peptides

7,8-dihydro-8-oxoguanine triphosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

7,8-dihydro-8-oxoguanine triphosphatase

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