SMTL ID : 5ms0.1

pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by cryo-EM

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-1-1-1-1-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain F: D.460, D.462, D.464 Chain I: C.14 No protein-ligand interaction detected (PLIP)

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain F: C.72, C.88 No protein-ligand interaction detected (PLIP) ZN.3: 2 residues within 4Å: Chain F: C.888, C.898 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Said, N. et al., Structural basis for lambda N-dependent processive transcription antitermination. Nat Microbiol (2017)

Release Date

2017-05-03

Peptides

Antitermination protein N: A
DNA-directed RNA polymerase subunit alpha: CD
DNA-directed RNA polymerase subunit beta: E
DNA-directed RNA polymerase subunit beta': F
30S ribosomal protein S10: G
Transcription termination/antitermination protein NusG: H
Transcription antitermination protein NusB: L
Transcription termination/antitermination protein NusA: M
DNA-directed RNA polymerase subunit omega: N

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
N

C
A

D
B

E
C

F
D

G
E

H
F

L
L

M
M

N
O

Antitermination protein N

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

30S ribosomal protein S10

Transcription termination/antitermination protein NusG

Transcription antitermination protein NusB

Transcription termination/antitermination protein NusA

DNA-directed RNA polymerase subunit omega

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