SMTL ID : 5x2c.1 (1 other biounit)

Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(5)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: K.25, L.27, K.37, L.101 Ligands: 7XR.4 No protein-ligand interaction detected (PLIP) EDO.2: 5 residues within 4Å: Chain A: N.80, P.81, H.82, K.132, D.317 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.82 EDO.3: 3 residues within 4Å: Chain A: A.59, T.60, S.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.60, A:T.92

1 x 7XR: 9-cyclopentyl-N2-[4-(4-methylpiperazin-1-yl)phenyl]-N8-phenyl-purine-2,8-diamine(Non-covalent)

7XR.4: 15 residues within 4Å: Chain A: L.27, V.35, A.52, K.54, L.97, M.99, Q.100, L.101, M.102, P.103, G.105, L.153, T.163, D.164 Ligands: EDO.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.27, A:L.27, A:V.35, A:K.54, A:K.54, A:L.153 Hydrogen bonds: A:M.102, A:M.102, A:G.105 Water bridges: A:D.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, S.J. et al., Structural insights into drug development strategy targeting EGFR T790M/C797S. Oncotarget (2018)

Release Date

2018-02-21

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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