SMTL ID : 5gak.1

Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-oligomer
Ligands
1 x 3HE: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Schmidt, C. et al., Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome. Nucleic Acids Res. (2016)
Release Date
2016-02-24
Peptides
60S ribosomal protein L23-A: B
60S ribosomal protein L24-A: D
60S ribosomal protein L25: F
60S ribosomal protein L26-A: H
60S ribosomal protein L27-A: J
60S ribosomal protein L42-A: K
60S ribosomal protein L28: L
60S ribosomal protein L43-A: M
60S ribosomal protein L29: N
60S ribosomal protein L2-A: O
60S ribosomal protein L30: P
60S ribosomal protein L3: Q
60S ribosomal protein L31-A: R
60S ribosomal protein L4-A: S
60S ribosomal protein L32: T
60S ribosomal protein L5: U
60S ribosomal protein L33-A: V
60S ribosomal protein L6-A: W
60S ribosomal protein L34-A: X
60S ribosomal protein L7-A: Y
60S ribosomal protein L35-A: Z
60S ribosomal protein L8-A: 0
60S ribosomal protein L36-A: 1
60S ribosomal protein L9-A: 2
60S ribosomal protein L37-A: 3
60S ribosomal protein L11-A: 4
60S ribosomal protein L38: 5
60S ribosomal protein L13-A: 6
60S ribosomal protein L39: 7
60S ribosomal protein L14-B: 8
Ubiquitin-60S ribosomal protein L40: 9
60S ribosomal protein L15-A: a
60S ribosomal protein L41-A: b
60S ribosomal protein L16-A: c
Eukaryotic translation initiation factor 5A-1: d
60S ribosomal protein L17-A: e
ribosomal protein RPL1: f
60S ribosomal protein L18-A: g
60S ribosomal protein L10: h
60S ribosomal protein L19-A: i
60S ribosomal protein L20-A: j
60S ribosomal protein L21-A: k
60S ribosomal protein L22-A: l
nascent polypeptide chain: m
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
X
D
Y
F
Z
H
a
J
b
K
C
L
c
M
D
N
d
O
E
P
e
Q
F
R
f
S
G
T
g
U
H
V
h
W
I
X
i
Y
J
Z
j
0
K
1
k
2
L
3
l
4
M
5
m
6
N
7
n
8
O
9
o
a
P
b
p
c
Q
d
q
e
R
f
r
g
S
h
s
i
T
j
U
k
V
l
W
m
z

60S ribosomal protein L23-A

60S ribosomal protein L24-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

60S ribosomal protein L42-A

60S ribosomal protein L28

60S ribosomal protein L43-A

60S ribosomal protein L29

60S ribosomal protein L2-A

60S ribosomal protein L30

60S ribosomal protein L3

60S ribosomal protein L31-A

60S ribosomal protein L4-A

60S ribosomal protein L32

60S ribosomal protein L5

60S ribosomal protein L33-A

60S ribosomal protein L6-A

60S ribosomal protein L34-A

60S ribosomal protein L7-A

60S ribosomal protein L35-A

60S ribosomal protein L8-A

60S ribosomal protein L36-A

60S ribosomal protein L9-A

60S ribosomal protein L37-A

60S ribosomal protein L11-A

60S ribosomal protein L38

60S ribosomal protein L13-A

60S ribosomal protein L39

60S ribosomal protein L14-B

Ubiquitin-60S ribosomal protein L40

60S ribosomal protein L15-A

60S ribosomal protein L41-A

60S ribosomal protein L16-A

Eukaryotic translation initiation factor 5A-1

60S ribosomal protein L17-A

ribosomal protein RPL1

60S ribosomal protein L18-A

60S ribosomal protein L10

60S ribosomal protein L19-A

60S ribosomal protein L20-A

60S ribosomal protein L21-A

60S ribosomal protein L22-A

nascent polypeptide chain

Related Entries With Identical Sequence

1t0k.1 | 1tnv.1 | 1tnv.2 | 1tnv.3 | 1tnv.4 | 1tnv.5 | 2ww9.1 | 2wwa.1 | 2wwb.1 | 3a0h.1 | 3j16.1 | 3j6x.2 | 3j6x.3 | 3j6x.4 | 3j6x.5 | 3j6x.6 | 3j6x.7 | 3j6x.8 | 3j6x.9 | 3j6x.10 | 3j6x.11 | 3j6x.12 | 3j6x.13 | 3j6x.14 | 3j6x.15 | 3j6x.16 | 3j6x.17 | 3j6x.18 | 3j6x.19 | 3j6x.20  more...