SMTL ID : 6lhp.4 (3 other biounits)

The cryo-EM structure of coxsackievirus A16 mature virion in complex with Fab 14B10

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 12 residues within 4Å: Chain C: I.111, D.112, L.113, M.114, F.135, Y.155, V.192, Y.201, W.203, N.228, M.230, F.233 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:I.111, C:F.135, C:Y.155, C:Y.155, C:V.192, C:Y.201, C:F.233 Hydrogen bonds: C:D.112, C:L.113, C:N.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, M. et al., Identification of Antibodies with Non-overlapping Neutralization Sites that Target Coxsackievirus A16. Cell Host Microbe (2020)

Release Date

2020-02-05

Peptides

light chain variable region of Fab 14B10: A
heavy chain variable region of Fab 14B10: B
VP1 protein: C
VP2 protein: D
VP3 protein: E
VP4 protein: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
A

D
B

E
C

F
D

light chain variable region of Fab 14B10

heavy chain variable region of Fab 14B10

VP1 protein

VP2 protein

VP3 protein

VP4 protein

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