6tqo.1 | SWISS-MODEL Template Library

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SMTL ID : 6tqo.1

rrn anti-termination complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-2-1-1-1-1-mer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1:	5 residues within 4Å: Chain A: E.71, D.88, L.90, D.91, D.216 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.71, A:E.71, A:D.88, A:D.88, A:L.90
MG.2:	3 residues within 4Å: Chain B: E.71, D.88, L.90 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.71, B:E.71, B:D.88, B:D.88, B:L.90
MG.5:	4 residues within 4Å: Chain K: D.460, D.462, D.464 Chain M: C.85 5 PLIP interactions: 5 interactions with chain K Metal complexes: K:D.460, K:D.460, K:D.462, K:D.464, K:D.464

2 x ZN: ZINC ION(Non-covalent)

ZN.3:	6 residues within 4Å: Chain K: C.814, R.883, C.888, D.889, C.895, C.898 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:C.814, K:C.888, K:C.895, K:C.898
ZN.4:	4 residues within 4Å: Chain K: C.70, C.72, C.85, C.88 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:C.70, K:C.72, K:C.85, K:C.88

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Huang, Y.H. et al., Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis. Mol.Cell (2020)

Release Date

2020-08-05

Peptides

Inositol monophosphatase: A
Inositol-1-monophosphatase: B
Transcription termination/antitermination protein NusA: C
Transcription antitermination protein NusB: D
30S ribosomal protein S10: E
Transcription termination/antitermination protein NusG: F
DNA-directed RNA polymerase subunit alpha: GH
DNA-directed RNA polymerase subunit omega: I
DNA-directed RNA polymerase subunit beta: J
DNA-directed RNA polymerase subunit beta': K
30S ribosomal protein S4: L

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
T

B
S

C
A

D
B

E
E

F
G

G
U

H
V

I
W

J
X

K
Y

L
C

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Inositol monophosphatase

Inositol-1-monophosphatase

Transcription termination/antitermination protein NusA

Transcription antitermination protein NusB

30S ribosomal protein S10

Transcription termination/antitermination protein NusG

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit omega

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

30S ribosomal protein S4

Related Entries With Identical Sequence

3iyd.1 | 3lu0.1 | 4jk1.1 | 4jk1.2 | 4jk2.1 | 4jk2.2 | 4jkr.1 | 4jkr.2 | 4kmu.1 | 4kmu.2 | 4kn4.1 | 4kn4.2 | 4kn7.1 | 4kn7.2 | 4ljz.1 | 4ljz.2 | 4lk0.1 | 4lk0.2 | 4lk1.1 | 4lk1.2 | 4llg.1 | 4llg.2 | 4mex.1 | 4mex.2 | 4mey.1 | 4mey.2 | 4s20.1 | 4s20.2 | 4xsx.1 | 4xsx.2 more...less...

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Background

Transparent

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