SMTL ID : 6wyv.1

E. coli 50S ribosome bound to compounds 47 and VS1

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-mer
Ligands
1 x MHW- THR- DBB- PRO- MEA- MHV- 004: VIRGINIAMYCIN S1(Non-functional Binders)
1 x O7S: (3R,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-12-methyl-3-(propan-2-yl)-4-(prop-2-en-1-yl)-3,4,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,7H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,22-trione(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Li, Q. et al., Synthetic group A streptogramin antibiotics that overcome Vat resistance. Nature (2020)
Release Date
2020-06-17
Peptides
50S ribosomal protein L2: C
50S ribosomal protein L15: D
50S ribosomal protein L4: E
50S ribosomal protein L3: F
50S ribosomal protein L13: G
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
C
K
D
L
E
M
F
N
G
O

50S ribosomal protein L2

50S ribosomal protein L15

50S ribosomal protein L4

50S ribosomal protein L3

50S ribosomal protein L13

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2j28.1 | 3bbx.1 | 3j5l.1 | 3j7z.1 | 3j8g.1 | 3j9y.1 | 3j9z.1 | 3ja1.1 | 3jbu.1 | 3jbv.1 | 3jcd.1 | 3jce.1 | 3jcj.1 | 3jcn.1 | 4csu.1 | 4peb.1 | 4pec.1 | 4tom.1 | 4too.1 | 4tov.1 | 4tox.1 | 4tp1.1 | 4tp3.1 | 4tp5.1 | 4tp7.1 | 4tp9.1 | 4tpb.1 | 4tpd.1 | 4tpf.1 | 4u1u.1  more...