SMTL ID : 8qoa.1

Structure of SecM-stalled Escherichia coli 70S ribosome

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 2.00 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

1 x C- A: E-site tRNA(Non-covalent)

C-A.1: 9 residues within 4Å: Chain C: H.31 Chain h: H.20, A.21, L.22 Chain n: C.2394, C.2395, G.2421, C.2422, A.2432 Protein-ligand interaction information (PLIP) not available

1 x G- C- U- G- G- C- C- C- U: mRNA(Non-covalent)

G-C-U-G-G-C-C-C-U.2: 22 residues within 4Å: Chain M: K.44 Chain W: G.34, C.35, C.36, A.37 Ligands: MG.7 Chain l: U.35, G.36, G.37, G.38 Chain o: G.530, G.693, U.789, A.790, G.926, C.1400, G.1401, C.1402, C.1403, A.1492, A.1493, U.1498 Protein-ligand interaction information (PLIP) not available

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain D: C.11, C.14, C.27, H.33 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.11, D:C.14, D:C.27, D:H.33 ZN.26: 4 residues within 4Å: Chain m: C.16, C.18, C.37, C.40 4 PLIP interactions: 4 interactions with chain m Metal complexes: m:C.16, m:C.18, m:C.37, m:C.40

132 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)

K.4: 6 residues within 4Å: Chain G: A.79, A.80, L.82, G.84, T.86 Chain o: U.5 Ligand excluded by PLIP K.5: 4 residues within 4Å: Chain I: F.78, R.79, N.81, V.84 Ligand excluded by PLIP K.6: 4 residues within 4Å: Chain N: T.20, I.22, V.25 Chain o: U.1330 Ligand excluded by PLIP K.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP K.15: 3 residues within 4Å: Chain Y: G.234, G.235, G.237 Ligand excluded by PLIP K.16: 5 residues within 4Å: Chain Y: T.223, H.232, G.233, G.234, F.240 Ligand excluded by PLIP K.17: 3 residues within 4Å: Chain Y: Y.83, D.84, R.87 Ligand excluded by PLIP K.21: 4 residues within 4Å: Chain 0: A.161, R.162, L.164, V.167 Ligand excluded by PLIP K.23: 5 residues within 4Å: Chain g: R.25, S.35, I.36 Chain n: C.2354, G.2355 Ligand excluded by PLIP K.27: 5 residues within 4Å: Chain n: G.2061, G.2447, A.2451, C.2501, U.2504 Ligand excluded by PLIP K.28: 4 residues within 4Å: Chain n: G.1022, U.1023, G.1024, G.1025 Ligand excluded by PLIP K.29: 3 residues within 4Å: Chain n: A.195, A.196, A.197 Ligand excluded by PLIP K.30: 5 residues within 4Å: Ligands: MG.244 Chain n: G.375, G.376, C.398, U.399 Ligand excluded by PLIP K.31: 4 residues within 4Å: Chain n: A.2453, U.2506, A.2572, C.2573 Ligand excluded by PLIP K.32: 6 residues within 4Å: Chain n: G.533, U.534, G.535, U.558, G.559, C.560 Ligand excluded by PLIP K.33: 6 residues within 4Å: Ligands: MG.310 Chain n: G.1202, U.1203, A.1204, A.1241, U.1242 Ligand excluded by PLIP K.34: 5 residues within 4Å: Chain 7: G.105 Chain n: A.1287, G.1288, U.1326, A.1327 Ligand excluded by PLIP K.35: 5 residues within 4Å: Chain n: U.1394, A.1395, U.1397, U.1602, A.1603 Ligand excluded by PLIP K.36: 5 residues within 4Å: Chain n: C.129, C.130, C.1348, A.1598, U.1599 Ligand excluded by PLIP K.37: 5 residues within 4Å: Chain n: U.1344, G.1346, A.1347, U.1599, C.1600 Ligand excluded by PLIP K.38: 4 residues within 4Å: Chain n: G.326, G.327, A.332, C.335 Ligand excluded by PLIP K.39: 5 residues within 4Å: Chain n: G.303, U.304, C.305, G.312, G.313 Ligand excluded by PLIP K.40: 3 residues within 4Å: Chain n: G.971, G.974, G.989 Ligand excluded by PLIP K.41: 1 residues within 4Å: Chain n: A.1265 Ligand excluded by PLIP K.42: 5 residues within 4Å: Chain n: C.838, U.839, G.938, G.939, G.940 Ligand excluded by PLIP K.43: 4 residues within 4Å: Chain a: R.33 Chain n: A.1253, A.1254, G.1256 Ligand excluded by PLIP K.44: 4 residues within 4Å: Chain n: U.1769, G.1770, U.1982, G.1983 Ligand excluded by PLIP K.45: 5 residues within 4Å: Chain n: A.1307, A.1308, G.1309, C.1605, C.1606 Ligand excluded by PLIP K.46: 4 residues within 4Å: Chain n: A.1385, C.1386, A.1470, G.1471 Ligand excluded by PLIP K.47: 5 residues within 4Å: Chain n: G.1471, C.1472, G.1519, U.1520, G.1521 Ligand excluded by PLIP K.48: 5 residues within 4Å: Chain n: G.1215, G.1216, C.1233, U.1234, G.1235 Ligand excluded by PLIP K.49: 3 residues within 4Å: Chain n: G.2508, G.2576, U.2580 Ligand excluded by PLIP K.50: 5 residues within 4Å: Chain n: G.407, G.408, G.409, C.418, U.419 Ligand excluded by PLIP K.51: 5 residues within 4Å: Chain n: A.599, G.600, C.601, G.656, U.657 Ligand excluded by PLIP K.52: 5 residues within 4Å: Chain n: A.833, G.834, C.835, A.943, C.944 Ligand excluded by PLIP K.53: 4 residues within 4Å: Chain n: G.1863, U.1864, G.1878, C.1879 Ligand excluded by PLIP K.54: 3 residues within 4Å: Chain n: G.669, G.801, U.803 Ligand excluded by PLIP K.55: 5 residues within 4Å: Chain n: C.2681, U.2684, G.2685, U.2724, A.2725 Ligand excluded by PLIP K.56: 6 residues within 4Å: Chain e: S.68, N.69 Chain n: G.327, U.328, A.332, C.335 Ligand excluded by PLIP K.57: 5 residues within 4Å: Chain n: G.77, U.78, G.107, G.108, C.109 Ligand excluded by PLIP K.58: 4 residues within 4Å: Chain n: U.2022, G.2053, C.2616, U.2617 Ligand excluded by PLIP K.59: 4 residues within 4Å: Chain n: U.2622, G.2623, G.2825, A.2826 Ligand excluded by PLIP K.60: 3 residues within 4Å: Chain n: G.2053, G.2056, A.2577 Ligand excluded by PLIP K.61: 4 residues within 4Å: Chain n: G.530, A.2037, G.2038, U.2039 Ligand excluded by PLIP K.62: 5 residues within 4Å: Chain n: A.2051, A.2052, G.2053, A.2577, A.2614 Ligand excluded by PLIP K.63: 3 residues within 4Å: Chain n: C.192, U.193, U.202 Ligand excluded by PLIP K.64: 3 residues within 4Å: Ligands: MG.195 Chain n: G.2447, A.2448 Ligand excluded by PLIP K.65: 4 residues within 4Å: Chain n: C.2072, U.2245, G.2436, G.2437 Ligand excluded by PLIP K.66: 5 residues within 4Å: Chain n: G.778, U.779, G.780, G.785, C.786 Ligand excluded by PLIP K.67: 4 residues within 4Å: Chain n: G.775, G.776, A.793, A.794 Ligand excluded by PLIP K.68: 5 residues within 4Å: Chain n: A.2080, G.2237, G.2238, G.2239, U.2240 Ligand excluded by PLIP K.69: 4 residues within 4Å: Chain n: C.1838, U.1841, G.1842, U.1898 Ligand excluded by PLIP K.70: 4 residues within 4Å: Chain n: U.2092, C.2226, A.2227, G.2228 Ligand excluded by PLIP K.71: 5 residues within 4Å: Chain n: G.2201, U.2202, U.2220, G.2221, C.2222 Ligand excluded by PLIP K.72: 7 residues within 4Å: Ligands: MG.192 Chain n: A.575, U.576, U.2500, C.2501, A.2503, U.2504 Ligand excluded by PLIP K.73: 3 residues within 4Å: Chain n: A.2542, G.2543, G.2544 Ligand excluded by PLIP K.74: 6 residues within 4Å: Chain n: G.2525, G.2526, C.2527, G.2536, U.2537, C.2538 Ligand excluded by PLIP K.75: 3 residues within 4Å: Chain n: C.2475, U.2477, G.2529 Ligand excluded by PLIP K.76: 3 residues within 4Å: Chain n: A.1126, G.2464, C.2465 Ligand excluded by PLIP K.77: 6 residues within 4Å: Chain n: A.2513, U.2514, C.2515, G.2569, G.2570, U.2571 Ligand excluded by PLIP K.78: 4 residues within 4Å: Ligands: MG.175 Chain n: A.2577, G.2578, C.2579 Ligand excluded by PLIP K.79: 3 residues within 4Å: Chain n: G.1826, C.1902, U.1971 Ligand excluded by PLIP K.80: 3 residues within 4Å: Chain n: G.2289, G.2290, U.2291 Ligand excluded by PLIP K.81: 5 residues within 4Å: Chain n: G.638, U.639, G.648, G.649, C.650 Ligand excluded by PLIP K.82: 4 residues within 4Å: Chain n: G.2345, C.2347, G.2370, G.2371 Ligand excluded by PLIP K.83: 5 residues within 4Å: Ligands: MG.199 Chain n: U.827, A.2426, C.2427, G.2429 Ligand excluded by PLIP K.84: 6 residues within 4Å: Chain n: G.949, G.950, C.951, G.966, U.967, C.968 Ligand excluded by PLIP K.85: 1 residues within 4Å: Chain n: G.2250 Ligand excluded by PLIP K.86: 4 residues within 4Å: Chain n: U.1939, A.1966, C.1967, G.2592 Ligand excluded by PLIP K.87: 3 residues within 4Å: Chain n: A.2776, A.2781, G.2782 Ligand excluded by PLIP K.88: 5 residues within 4Å: Chain n: G.2686, U.2687, G.2688, G.2722, C.2723 Ligand excluded by PLIP K.89: 6 residues within 4Å: Chain n: G.2697, U.2698, C.2699, G.2708, G.2709, C.2710 Ligand excluded by PLIP K.90: 4 residues within 4Å: Chain n: G.1452, A.1453, G.1456, U.1457 Ligand excluded by PLIP K.91: 5 residues within 4Å: Chain n: A.2850, A.2851, G.2852, U.2865, U.2866 Ligand excluded by PLIP K.92: 4 residues within 4Å: Chain n: U.2849, A.2850, U.2865, U.2866 Ligand excluded by PLIP K.93: 3 residues within 4Å: Chain n: A.1784, A.1785, A.1981 Ligand excluded by PLIP K.94: 6 residues within 4Å: Ligands: MG.284 Chain n: G.2846, U.2847, G.2848, G.2869, C.2870 Ligand excluded by PLIP K.95: 4 residues within 4Å: Chain n: G.2250, G.2251, C.2496, A.2497 Ligand excluded by PLIP K.96: 6 residues within 4Å: Chain n: G.597, U.598, A.599, U.658, G.659, C.660 Ligand excluded by PLIP K.97: 5 residues within 4Å: Chain n: U.593, U.594, G.662, G.663, G.664 Ligand excluded by PLIP K.98: 4 residues within 4Å: Chain n: U.588, A.668, A.670, C.671 Ligand excluded by PLIP K.99: 5 residues within 4Å: Chain 6: G.32 Chain n: A.941, G.942, G.1190, G.1191 Ligand excluded by PLIP K.100: 5 residues within 4Å: Chain n: G.1831, C.1832, G.1972, G.1973, C.1974 Ligand excluded by PLIP K.101: 5 residues within 4Å: Chain Y: T.219, R.221 Chain n: A.1789, C.1790, G.1828 Ligand excluded by PLIP K.102: 3 residues within 4Å: Chain 0: T.53 Chain n: G.452, A.470 Ligand excluded by PLIP K.103: 4 residues within 4Å: Ligands: MG.121 Chain n: G.452, A.453, A.471 Ligand excluded by PLIP K.104: 3 residues within 4Å: Chain Y: G.235, E.236 Chain n: A.2589 Ligand excluded by PLIP K.105: 4 residues within 4Å: Chain n: C.1838, G.1839, G.1840, A.1899 Ligand excluded by PLIP K.106: 5 residues within 4Å: Chain Z: G.135, S.137 Chain n: A.743, U.2580, G.2581 Ligand excluded by PLIP K.107: 3 residues within 4Å: Chain n: U.2584, U.2585, A.2602 Ligand excluded by PLIP K.108: 5 residues within 4Å: Chain Y: E.236 Ligands: MG.176 Chain n: A.2439, C.2440, A.2600 Ligand excluded by PLIP K.109: 3 residues within 4Å: Chain n: G.1299, A.1637, C.1638 Ligand excluded by PLIP K.110: 4 residues within 4Å: Chain n: A.1637, A.1759, C.1760, A.2711 Ligand excluded by PLIP K.111: 4 residues within 4Å: Chain 0: R.67, A.68 Chain n: G.1256, C.1257 Ligand excluded by PLIP K.112: 5 residues within 4Å: Chain Y: R.52, H.53, T.219 Chain n: G.1824, U.1825 Ligand excluded by PLIP K.113: 3 residues within 4Å: Chain n: C.786, C.787, C.791 Ligand excluded by PLIP K.114: 6 residues within 4Å: Chain n: G.953, G.954, U.955, G.962, U.963, C.964 Ligand excluded by PLIP K.115: 5 residues within 4Å: Chain n: U.387, G.388, U.390, A.391, U.392 Ligand excluded by PLIP K.333: 5 residues within 4Å: Chain o: A.949, G.971, G.1233, C.1234, U.1364 Ligand excluded by PLIP K.334: 5 residues within 4Å: Chain o: U.1073, G.1074, A.1082, U.1083, G.1084 Ligand excluded by PLIP K.335: 6 residues within 4Å: Chain o: C.1051, U.1052, C.1200, U.1205, G.1206, G.1207 Ligand excluded by PLIP K.336: 5 residues within 4Å: Ligands: MG.371 Chain o: A.978, C.979, G.1222, C.1322 Ligand excluded by PLIP K.337: 3 residues within 4Å: Chain o: A.1319, C.1322, G.1323 Ligand excluded by PLIP K.338: 3 residues within 4Å: Chain o: C.1303, G.1304, G.1305 Ligand excluded by PLIP K.339: 4 residues within 4Å: Chain o: U.943, G.944, U.1232, G.1233 Ligand excluded by PLIP K.340: 4 residues within 4Å: Chain o: U.943, G.944, G.945, G.1337 Ligand excluded by PLIP K.341: 5 residues within 4Å: Chain N: G.99, Q.100 Chain o: U.1224, A.1225, C.1322 Ligand excluded by PLIP K.342: 5 residues within 4Å: Chain o: G.1053, G.1058, C.1059, G.1198, U.1199 Ligand excluded by PLIP K.343: 5 residues within 4Å: Chain o: G.1241, G.1242, C.1243, G.1294, U.1295 Ligand excluded by PLIP K.344: 5 residues within 4Å: Ligands: MG.423 Chain o: A.1499, A.1500, A.1508, C.1521 Ligand excluded by PLIP K.345: 5 residues within 4Å: Ligands: K.346 Chain o: G.107, G.324, A.325, G.326 Ligand excluded by PLIP K.346: 6 residues within 4Å: Chain U: R.10 Ligands: K.345 Chain o: G.107, G.108, A.109, G.326 Ligand excluded by PLIP K.347: 6 residues within 4Å: Chain o: G.776, C.779, A.780, U.801, A.802, G.803 Ligand excluded by PLIP K.348: 5 residues within 4Å: Chain o: A.563, C.564, U.565, G.566, G.567 Ligand excluded by PLIP K.349: 5 residues within 4Å: Chain o: G.11, U.12, G.21, G.22, C.23 Ligand excluded by PLIP K.350: 5 residues within 4Å: Chain o: C.372, U.375, G.376, U.387, A.389 Ligand excluded by PLIP K.351: 2 residues within 4Å: Chain o: A.415, G.416 Ligand excluded by PLIP K.352: 5 residues within 4Å: Chain o: C.924, G.925, G.927, U.1390, U.1391 Ligand excluded by PLIP K.353: 3 residues within 4Å: Chain o: A.865, C.866, G.1079 Ligand excluded by PLIP K.354: 5 residues within 4Å: Chain o: C.1501, A.1502, G.1504, A.1507, A.1508 Ligand excluded by PLIP K.355: 2 residues within 4Å: Chain o: A.780, G.800 Ligand excluded by PLIP K.356: 4 residues within 4Å: Chain o: G.664, G.666, U.740, G.741 Ligand excluded by PLIP K.357: 6 residues within 4Å: Chain o: G.1511, U.1512, A.1513, U.1522, G.1523, C.1524 Ligand excluded by PLIP K.358: 6 residues within 4Å: Chain U: K.9 Chain o: G.61, U.62, G.104, G.105, C.106 Ligand excluded by PLIP K.359: 5 residues within 4Å: Chain o: G.115, A.116, G.117, U.118, G.289 Ligand excluded by PLIP K.360: 4 residues within 4Å: Chain o: G.293, A.303, U.304, G.305 Ligand excluded by PLIP K.361: 3 residues within 4Å: Chain o: C.314, A.315, G.318 Ligand excluded by PLIP K.362: 4 residues within 4Å: Chain o: G.885, G.886, G.887, U.911 Ligand excluded by PLIP K.363: 4 residues within 4Å: Chain o: G.251, U.252, G.266, U.268 Ligand excluded by PLIP K.364: 3 residues within 4Å: Chain o: U.256, G.257, G.266 Ligand excluded by PLIP K.365: 3 residues within 4Å: Chain o: C.110, G.111, G.112 Ligand excluded by PLIP K.366: 4 residues within 4Å: Chain M: P.45, N.46 Chain o: C.518, G.530 Ligand excluded by PLIP

288 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.7: 3 residues within 4Å: Ligands: G-C-U-G-G-C-C-C-U.2 Chain o: G.1401, C.1402 No protein-ligand interaction detected (PLIP) MG.9: 5 residues within 4Å: Chain W: C.75, A.76 Chain n: U.2585, C.2601, A.2602 No protein-ligand interaction detected (PLIP) MG.10: 1 residues within 4Å: Chain X: U.32 No protein-ligand interaction detected (PLIP) MG.11: 4 residues within 4Å: Chain X: G.23, G.56, A.57, A.58 No protein-ligand interaction detected (PLIP) MG.12: 2 residues within 4Å: Chain X: G.18, G.64 No protein-ligand interaction detected (PLIP) MG.13: 1 residues within 4Å: Chain X: G.100 No protein-ligand interaction detected (PLIP) MG.14: 1 residues within 4Å: Chain X: U.95 No protein-ligand interaction detected (PLIP) MG.18: 2 residues within 4Å: Chain Y: H.53 Chain n: G.1824 5 PLIP interactions: 1 interactions with chain Y, 4 Ligand-Water interactions Metal complexes: Y:H.53, H2O.9, H2O.11, H2O.58, H2O.153 MG.19: 2 residues within 4Å: Chain Y: Q.60, P.85 No protein-ligand interaction detected (PLIP) MG.20: 2 residues within 4Å: Chain Z: H.140 Chain n: C.1658 5 PLIP interactions: 1 interactions with chain Z, 4 Ligand-Water interactions Metal complexes: Z:H.140, H2O.13, H2O.45, H2O.102, H2O.174 MG.22: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.24: 1 residues within 4Å: Chain k: D.20 6 PLIP interactions: 1 interactions with chain k, 5 Ligand-Water interactions Metal complexes: k:D.20, H2O.27, H2O.27, H2O.27, H2O.27, H2O.31 MG.116: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.117: 1 residues within 4Å: Chain n: U.120 No protein-ligand interaction detected (PLIP) MG.118: 1 residues within 4Å: Chain n: U.120 No protein-ligand interaction detected (PLIP) MG.119: 1 residues within 4Å: Chain n: A.218 No protein-ligand interaction detected (PLIP) MG.120: 3 residues within 4Å: Chain 0: G.81 Chain n: G.450, G.452 No protein-ligand interaction detected (PLIP) MG.121: 3 residues within 4Å: Ligands: K.103 Chain n: G.450, A.453 No protein-ligand interaction detected (PLIP) MG.122: 2 residues within 4Å: Chain n: A.526, C.527 No protein-ligand interaction detected (PLIP) MG.123: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.124: 2 residues within 4Å: Chain n: U.566, U.567 No protein-ligand interaction detected (PLIP) MG.125: 2 residues within 4Å: Chain n: G.831, A.945 No protein-ligand interaction detected (PLIP) MG.126: 1 residues within 4Å: Chain n: A.574 No protein-ligand interaction detected (PLIP) MG.127: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.128: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.129: 1 residues within 4Å: Chain n: G.619 No protein-ligand interaction detected (PLIP) MG.130: 3 residues within 4Å: Chain 6: N.99 Chain n: A.621, G.622 No protein-ligand interaction detected (PLIP) MG.131: 2 residues within 4Å: Chain n: G.733, A.761 No protein-ligand interaction detected (PLIP) MG.132: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.133: 1 residues within 4Å: Chain n: U.746 No protein-ligand interaction detected (PLIP) MG.134: 3 residues within 4Å: Chain n: A.750, A.751, A.1614 No protein-ligand interaction detected (PLIP) MG.135: 4 residues within 4Å: Chain n: A.782, A.783, G.784, A.2589 No protein-ligand interaction detected (PLIP) MG.136: 3 residues within 4Å: Chain n: G.784, G.2588, A.2589 No protein-ligand interaction detected (PLIP) MG.137: 1 residues within 4Å: Chain n: A.800 No protein-ligand interaction detected (PLIP) MG.138: 2 residues within 4Å: Chain n: A.675, A.802 No protein-ligand interaction detected (PLIP) MG.139: 2 residues within 4Å: Chain n: U.810, A.1253 No protein-ligand interaction detected (PLIP) MG.140: 4 residues within 4Å: Chain n: U.826, U.827, G.2429, A.2430 No protein-ligand interaction detected (PLIP) MG.141: 3 residues within 4Å: Chain n: C.944, A.945, C.946 No protein-ligand interaction detected (PLIP) MG.142: 1 residues within 4Å: Chain n: A.945 No protein-ligand interaction detected (PLIP) MG.143: 3 residues within 4Å: Chain n: C.948, G.962, U.963 No protein-ligand interaction detected (PLIP) MG.144: 1 residues within 4Å: Chain n: A.1156 No protein-ligand interaction detected (PLIP) MG.145: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.146: 4 residues within 4Å: Chain n: U.1267, A.1268, A.2005, C.2006 No protein-ligand interaction detected (PLIP) MG.147: 2 residues within 4Å: Chain n: A.1269, A.2005 No protein-ligand interaction detected (PLIP) MG.148: 4 residues within 4Å: Chain n: G.1271, A.1272, U.1647, U.1648 No protein-ligand interaction detected (PLIP) MG.149: 1 residues within 4Å: Chain n: U.1313 No protein-ligand interaction detected (PLIP) MG.150: 1 residues within 4Å: Chain n: G.1333 No protein-ligand interaction detected (PLIP) MG.151: 2 residues within 4Å: Chain n: U.1352, C.1376 No protein-ligand interaction detected (PLIP) MG.152: 2 residues within 4Å: Chain n: G.1358, G.1371 No protein-ligand interaction detected (PLIP) MG.153: 3 residues within 4Å: Chain n: A.1393, U.1394, C.1604 No protein-ligand interaction detected (PLIP) MG.154: 5 residues within 4Å: Chain n: C.1306, U.1394, A.1395, A.1603, C.1604 No protein-ligand interaction detected (PLIP) MG.155: 2 residues within 4Å: Chain n: C.1646, U.1647 No protein-ligand interaction detected (PLIP) MG.156: 3 residues within 4Å: Chain n: A.1664, G.1667, G.1992 No protein-ligand interaction detected (PLIP) MG.157: 2 residues within 4Å: Chain n: C.1986, C.2551 No protein-ligand interaction detected (PLIP) MG.158: 2 residues within 4Å: Chain n: C.1670, U.1671 No protein-ligand interaction detected (PLIP) MG.159: 1 residues within 4Å: Chain n: A.1678 No protein-ligand interaction detected (PLIP) MG.160: 1 residues within 4Å: Chain n: C.1774 No protein-ligand interaction detected (PLIP) MG.161: 1 residues within 4Å: Chain n: G.1776 No protein-ligand interaction detected (PLIP) MG.162: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.163: 2 residues within 4Å: Chain n: A.1900, A.1970 No protein-ligand interaction detected (PLIP) MG.164: 1 residues within 4Å: Chain n: C.2025 No protein-ligand interaction detected (PLIP) MG.165: 2 residues within 4Å: Chain n: G.2056, G.2057 No protein-ligand interaction detected (PLIP) MG.166: 2 residues within 4Å: Chain n: G.2061, G.2502 No protein-ligand interaction detected (PLIP) MG.167: 1 residues within 4Å: Chain n: A.2062 No protein-ligand interaction detected (PLIP) MG.168: 1 residues within 4Å: Chain n: U.2243 No protein-ligand interaction detected (PLIP) MG.169: 3 residues within 4Å: Chain n: C.2066, C.2248, U.2249 No protein-ligand interaction detected (PLIP) MG.170: 2 residues within 4Å: Chain n: A.2268, G.2269 No protein-ligand interaction detected (PLIP) MG.171: 1 residues within 4Å: Chain n: A.2270 No protein-ligand interaction detected (PLIP) MG.172: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.173: 1 residues within 4Å: Chain n: C.2499 No protein-ligand interaction detected (PLIP) MG.174: 4 residues within 4Å: Chain n: C.2517, A.2518, U.2519, A.2541 No protein-ligand interaction detected (PLIP) MG.175: 3 residues within 4Å: Ligands: K.78 Chain n: C.2579, C.2611 No protein-ligand interaction detected (PLIP) MG.176: 2 residues within 4Å: Ligands: K.108 Chain n: G.2588 No protein-ligand interaction detected (PLIP) MG.177: 2 residues within 4Å: Chain n: A.2711, G.2714 No protein-ligand interaction detected (PLIP) MG.178: 1 residues within 4Å: Chain n: A.299 No protein-ligand interaction detected (PLIP) MG.179: 2 residues within 4Å: Chain n: G.370, A.422 No protein-ligand interaction detected (PLIP) MG.180: 2 residues within 4Å: Chain n: G.411, A.2407 No protein-ligand interaction detected (PLIP) MG.181: 1 residues within 4Å: Chain n: A.572 No protein-ligand interaction detected (PLIP) MG.182: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.183: 2 residues within 4Å: Chain n: G.818, G.1187 No protein-ligand interaction detected (PLIP) MG.184: 1 residues within 4Å: Chain n: A.981 No protein-ligand interaction detected (PLIP) MG.185: 4 residues within 4Å: Chain n: G.989, A.990, C.991, G.1186 No protein-ligand interaction detected (PLIP) MG.186: 1 residues within 4Å: Chain n: A.1327 No protein-ligand interaction detected (PLIP) MG.187: 2 residues within 4Å: Chain n: A.1359, G.1360 No protein-ligand interaction detected (PLIP) MG.188: 3 residues within 4Å: Chain n: A.1439, U.1440, A.1551 No protein-ligand interaction detected (PLIP) MG.189: 2 residues within 4Å: Chain n: A.1635, U.1636 No protein-ligand interaction detected (PLIP) MG.190: 2 residues within 4Å: Chain n: C.2021, U.2022 No protein-ligand interaction detected (PLIP) MG.191: 2 residues within 4Å: Chain C: R.30 Chain n: U.2419 No protein-ligand interaction detected (PLIP) MG.192: 3 residues within 4Å: Ligands: K.72 Chain n: U.576, A.2503 No protein-ligand interaction detected (PLIP) MG.193: 1 residues within 4Å: Chain n: A.2705 No protein-ligand interaction detected (PLIP) MG.194: 5 residues within 4Å: Chain n: G.2447, A.2448, A.2497, C.2498, C.2499 No protein-ligand interaction detected (PLIP) MG.195: 4 residues within 4Å: Ligands: K.64 Chain n: G.570, A.2448, C.2499 No protein-ligand interaction detected (PLIP) MG.196: 3 residues within 4Å: Chain n: A.1780, U.1782, A.1783 No protein-ligand interaction detected (PLIP) MG.197: 3 residues within 4Å: Chain n: A.730, C.731, A.761 No protein-ligand interaction detected (PLIP) MG.198: 3 residues within 4Å: Chain n: C.740, A.1783, A.1784 No protein-ligand interaction detected (PLIP) MG.199: 5 residues within 4Å: Ligands: K.83 Chain n: U.826, C.2427, G.2428, G.2429 No protein-ligand interaction detected (PLIP) MG.200: 4 residues within 4Å: Chain n: C.2507, C.2573, G.2574, C.2575 No protein-ligand interaction detected (PLIP) MG.201: 3 residues within 4Å: Chain d: T.60 Chain n: A.1342, U.1602 No protein-ligand interaction detected (PLIP) MG.202: 4 residues within 4Å: Chain n: A.1669, C.1670, U.1671, G.2550 No protein-ligand interaction detected (PLIP) MG.203: 1 residues within 4Å: Chain n: G.862 No protein-ligand interaction detected (PLIP) MG.204: 1 residues within 4Å: Chain n: A.1938 No protein-ligand interaction detected (PLIP) MG.205: 4 residues within 4Å: Chain n: C.192, A.199, G.2242, U.2243 No protein-ligand interaction detected (PLIP) MG.206: 1 residues within 4Å: Chain n: G.1828 No protein-ligand interaction detected (PLIP) MG.207: 2 residues within 4Å: Chain n: A.1265, U.2615 No protein-ligand interaction detected (PLIP) MG.208: 3 residues within 4Å: Chain n: A.195, A.197, C.198 No protein-ligand interaction detected (PLIP) MG.209: 3 residues within 4Å: Chain n: C.1314, C.1315, G.1332 No protein-ligand interaction detected (PLIP) MG.210: 1 residues within 4Å: Chain n: A.1676 No protein-ligand interaction detected (PLIP) MG.211: 4 residues within 4Å: Chain n: C.509, C.510, U.511, G.512 No protein-ligand interaction detected (PLIP) MG.212: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.213: 4 residues within 4Å: Chain 4: K.39 Chain n: A.1008, A.1009, A.1010 No protein-ligand interaction detected (PLIP) MG.214: 2 residues within 4Å: Chain 6: K.36 Chain n: A.943 No protein-ligand interaction detected (PLIP) MG.215: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.216: 2 residues within 4Å: Chain n: G.578, G.2018 No protein-ligand interaction detected (PLIP) MG.217: 1 residues within 4Å: Chain n: U.963 No protein-ligand interaction detected (PLIP) MG.218: 2 residues within 4Å: Chain n: A.1664, A.1665 No protein-ligand interaction detected (PLIP) MG.219: 2 residues within 4Å: Chain n: A.2406, U.2408 No protein-ligand interaction detected (PLIP) MG.220: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.221: 1 residues within 4Å: Chain n: A.1237 No protein-ligand interaction detected (PLIP) MG.222: 5 residues within 4Å: Chain 7: H.3 Chain Z: G.115 Chain n: A.2820, A.2821, G.2822 4 PLIP interactions: 1 interactions with chain Z, 1 interactions with chain 7, 2 Ligand-Water interactions Metal complexes: Z:G.115, 7:H.3, H2O.145, H2O.150 MG.223: 3 residues within 4Å: Chain n: G.2289, U.2384, C.2385 No protein-ligand interaction detected (PLIP) MG.224: 2 residues within 4Å: Chain d: N.59 Chain n: C.1398 No protein-ligand interaction detected (PLIP) MG.225: 2 residues within 4Å: Chain n: G.2293, G.2294 No protein-ligand interaction detected (PLIP) MG.226: 1 residues within 4Å: Chain n: G.177 No protein-ligand interaction detected (PLIP) MG.227: 2 residues within 4Å: Chain n: G.1157, C.1158 No protein-ligand interaction detected (PLIP) MG.228: 1 residues within 4Å: Chain n: C.1376 No protein-ligand interaction detected (PLIP) MG.229: 3 residues within 4Å: Chain n: C.2575, G.2576, A.2577 No protein-ligand interaction detected (PLIP) MG.230: 3 residues within 4Å: Chain n: A.374, G.375, C.393 No protein-ligand interaction detected (PLIP) MG.231: 5 residues within 4Å: Chain n: U.1023, G.1024, G.1025, G.1026, C.1135 No protein-ligand interaction detected (PLIP) MG.232: 3 residues within 4Å: Chain n: A.1378, U.1379, G.1380 No protein-ligand interaction detected (PLIP) MG.233: 3 residues within 4Å: Chain n: C.1994, U.1995, U.2511 No protein-ligand interaction detected (PLIP) MG.234: 3 residues within 4Å: Chain n: C.1607, U.1621, G.1622 No protein-ligand interaction detected (PLIP) MG.235: 3 residues within 4Å: Chain n: C.731, C.732, G.760 No protein-ligand interaction detected (PLIP) MG.236: 2 residues within 4Å: Chain n: C.787, U.790 No protein-ligand interaction detected (PLIP) MG.237: 1 residues within 4Å: Chain n: A.699 No protein-ligand interaction detected (PLIP) MG.238: 4 residues within 4Å: Chain n: C.1967, G.1968, C.2591, G.2592 No protein-ligand interaction detected (PLIP) MG.239: 3 residues within 4Å: Chain Y: E.236 Chain n: U.2593, A.2600 No protein-ligand interaction detected (PLIP) MG.240: 1 residues within 4Å: Chain n: G.2543 No protein-ligand interaction detected (PLIP) MG.241: 2 residues within 4Å: Chain n: G.2644, G.2645 No protein-ligand interaction detected (PLIP) MG.242: 2 residues within 4Å: Chain n: A.477, A.1237 No protein-ligand interaction detected (PLIP) MG.243: 2 residues within 4Å: Chain n: A.2071, U.2243 No protein-ligand interaction detected (PLIP) MG.244: 2 residues within 4Å: Ligands: K.30 Chain n: G.375 No protein-ligand interaction detected (PLIP) MG.245: 1 residues within 4Å: Chain n: G.376 No protein-ligand interaction detected (PLIP) MG.246: 1 residues within 4Å: Chain n: G.410 No protein-ligand interaction detected (PLIP) MG.247: 3 residues within 4Å: Chain n: A.586, U.1249, G.1250 No protein-ligand interaction detected (PLIP) MG.248: 1 residues within 4Å: Chain n: C.527 No protein-ligand interaction detected (PLIP) MG.249: 2 residues within 4Å: Chain n: A.1189, G.1190 No protein-ligand interaction detected (PLIP) MG.250: 1 residues within 4Å: Chain n: G.2447 No protein-ligand interaction detected (PLIP) MG.251: 2 residues within 4Å: Chain n: U.2028, A.2033 No protein-ligand interaction detected (PLIP) MG.252: 1 residues within 4Å: Chain n: A.670 No protein-ligand interaction detected (PLIP) MG.253: 1 residues within 4Å: Chain n: G.830 No protein-ligand interaction detected (PLIP) MG.254: 3 residues within 4Å: Chain n: C.816, C.817, G.1187 No protein-ligand interaction detected (PLIP) MG.255: 2 residues within 4Å: Chain n: A.975, G.976 No protein-ligand interaction detected (PLIP) MG.256: 4 residues within 4Å: Chain n: C.678, G.776, A.2071, C.2072 No protein-ligand interaction detected (PLIP) MG.257: 3 residues within 4Å: Chain Y: P.227 Chain n: U.2074, G.2239 No protein-ligand interaction detected (PLIP) MG.258: 2 residues within 4Å: Chain n: G.738, A.739 No protein-ligand interaction detected (PLIP) MG.259: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.260: 2 residues within 4Å: Chain n: U.999, C.1153 No protein-ligand interaction detected (PLIP) MG.261: 1 residues within 4Å: Chain n: G.1125 No protein-ligand interaction detected (PLIP) MG.262: 1 residues within 4Å: Chain n: U.1132 No protein-ligand interaction detected (PLIP) MG.263: 4 residues within 4Å: Chain n: A.1262, U.1263, A.2014, A.2015 No protein-ligand interaction detected (PLIP) MG.264: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.265: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.266: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.267: 1 residues within 4Å: Chain n: C.1639 No protein-ligand interaction detected (PLIP) MG.268: 2 residues within 4Å: Chain n: C.1298, C.1639 No protein-ligand interaction detected (PLIP) MG.269: 5 residues within 4Å: Chain n: G.1355, G.1356, G.1374, U.1375, C.1376 No protein-ligand interaction detected (PLIP) MG.270: 1 residues within 4Å: Chain n: U.1662 No protein-ligand interaction detected (PLIP) MG.271: 2 residues within 4Å: Chain n: G.2688, G.2719 No protein-ligand interaction detected (PLIP) MG.272: 2 residues within 4Å: Chain n: G.1828, G.1973 No protein-ligand interaction detected (PLIP) MG.273: 1 residues within 4Å: Chain n: C.1941 No protein-ligand interaction detected (PLIP) MG.274: 1 residues within 4Å: Chain n: G.561 No protein-ligand interaction detected (PLIP) MG.275: 2 residues within 4Å: Chain n: A.2051, G.2578 No protein-ligand interaction detected (PLIP) MG.276: 2 residues within 4Å: Chain n: C.2326, A.2386 No protein-ligand interaction detected (PLIP) MG.277: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.278: 3 residues within 4Å: Chain n: G.2581, G.2582, G.2583 No protein-ligand interaction detected (PLIP) MG.279: 3 residues within 4Å: Chain n: C.2681, A.2682, G.2722 No protein-ligand interaction detected (PLIP) MG.280: 2 residues within 4Å: Chain n: G.2686, G.2688 No protein-ligand interaction detected (PLIP) MG.281: 2 residues within 4Å: Chain n: A.2748, U.2754 No protein-ligand interaction detected (PLIP) MG.282: 1 residues within 4Å: Chain n: G.2819 No protein-ligand interaction detected (PLIP) MG.283: 3 residues within 4Å: Chain n: G.2838, G.2839, U.2878 No protein-ligand interaction detected (PLIP) MG.284: 4 residues within 4Å: Ligands: K.94 Chain n: G.2846, U.2847, G.2848 No protein-ligand interaction detected (PLIP) MG.285: 1 residues within 4Å: Chain n: U.2707 No protein-ligand interaction detected (PLIP) MG.286: 1 residues within 4Å: Chain n: G.1162 No protein-ligand interaction detected (PLIP) MG.287: 3 residues within 4Å: Chain n: G.1846, A.1847, G.1891 No protein-ligand interaction detected (PLIP) MG.288: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.289: 1 residues within 4Å: Chain n: G.2603 No protein-ligand interaction detected (PLIP) MG.290: 2 residues within 4Å: Chain l: A.77 Chain n: C.2452 No protein-ligand interaction detected (PLIP) MG.291: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.292: 2 residues within 4Å: Chain n: C.2063, C.2064 No protein-ligand interaction detected (PLIP) MG.293: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.294: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.295: 1 residues within 4Å: Chain n: G.822 No protein-ligand interaction detected (PLIP) MG.296: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.297: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.298: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.299: 1 residues within 4Å: Chain n: U.1255 No protein-ligand interaction detected (PLIP) MG.300: 2 residues within 4Å: Chain n: A.685, G.774 No protein-ligand interaction detected (PLIP) MG.301: 2 residues within 4Å: Chain n: C.961, G.962 No protein-ligand interaction detected (PLIP) MG.302: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.303: 2 residues within 4Å: Chain 6: E.76 Chain n: G.628 No protein-ligand interaction detected (PLIP) MG.304: 2 residues within 4Å: Chain n: C.2646, U.2647 No protein-ligand interaction detected (PLIP) MG.305: 1 residues within 4Å: Chain n: U.1629 No protein-ligand interaction detected (PLIP) MG.306: 2 residues within 4Å: Chain n: G.1667, A.1668 No protein-ligand interaction detected (PLIP) MG.307: 2 residues within 4Å: Chain n: A.1970, U.1971 No protein-ligand interaction detected (PLIP) MG.308: 1 residues within 4Å: Chain n: G.446 No protein-ligand interaction detected (PLIP) MG.309: 3 residues within 4Å: Chain n: C.31, C.1200, G.1239 No protein-ligand interaction detected (PLIP) MG.310: 3 residues within 4Å: Ligands: K.33 Chain n: U.1203, A.1204 No protein-ligand interaction detected (PLIP) MG.311: 3 residues within 4Å: Chain n: A.1672, G.1673, U.2552 No protein-ligand interaction detected (PLIP) MG.312: 3 residues within 4Å: Chain n: A.2766, C.2767, U.2769 No protein-ligand interaction detected (PLIP) MG.313: 1 residues within 4Å: Chain n: A.825 No protein-ligand interaction detected (PLIP) MG.314: 1 residues within 4Å: Chain n: A.980 No protein-ligand interaction detected (PLIP) MG.315: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.316: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.317: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.318: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.319: 3 residues within 4Å: Chain n: G.230, C.418, U.419 No protein-ligand interaction detected (PLIP) MG.320: 1 residues within 4Å: Chain n: G.1814 No protein-ligand interaction detected (PLIP) MG.321: 1 residues within 4Å: Chain n: A.1899 No protein-ligand interaction detected (PLIP) MG.322: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.323: 1 residues within 4Å: Chain n: G.953 No protein-ligand interaction detected (PLIP) MG.324: 3 residues within 4Å: Chain n: U.1944, G.1945, U.1956 No protein-ligand interaction detected (PLIP) MG.325: 2 residues within 4Å: Chain n: A.2482, C.2483 No protein-ligand interaction detected (PLIP) MG.326: 2 residues within 4Å: Chain n: G.297, G.298 No protein-ligand interaction detected (PLIP) MG.327: 2 residues within 4Å: Chain n: A.1453, G.1455 No protein-ligand interaction detected (PLIP) MG.328: 1 residues within 4Å: Chain n: C.946 No protein-ligand interaction detected (PLIP) MG.329: 1 residues within 4Å: Chain n: A.2274 No protein-ligand interaction detected (PLIP) MG.330: 2 residues within 4Å: Chain n: C.2254, G.2255 No protein-ligand interaction detected (PLIP) MG.331: 3 residues within 4Å: Chain n: A.505, U.1234, G.1235 No protein-ligand interaction detected (PLIP) MG.332: 1 residues within 4Å: Chain n: C.1967 No protein-ligand interaction detected (PLIP) MG.367: 1 residues within 4Å: Chain o: G.953 No protein-ligand interaction detected (PLIP) MG.368: 2 residues within 4Å: Chain o: A.1110, U.1189 No protein-ligand interaction detected (PLIP) MG.369: 1 residues within 4Å: Chain O: A.2 No protein-ligand interaction detected (PLIP) MG.370: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.371: 7 residues within 4Å: Ligands: K.336 Chain o: C.979, C.980, U.981, G.1221, G.1222, C.1223 No protein-ligand interaction detected (PLIP) MG.372: 1 residues within 4Å: Chain o: G.1370 No protein-ligand interaction detected (PLIP) MG.373: 2 residues within 4Å: Chain o: G.944, G.945 No protein-ligand interaction detected (PLIP) MG.374: 2 residues within 4Å: Chain O: S.58 Chain o: C.980 No protein-ligand interaction detected (PLIP) MG.375: 1 residues within 4Å: Chain o: C.1069 No protein-ligand interaction detected (PLIP) MG.376: 1 residues within 4Å: Chain o: A.937 No protein-ligand interaction detected (PLIP) MG.377: 3 residues within 4Å: Chain o: G.963, A.964, U.1199 No protein-ligand interaction detected (PLIP) MG.378: 4 residues within 4Å: Chain o: C.1054, A.1196, A.1197, G.1198 No protein-ligand interaction detected (PLIP) MG.379: 4 residues within 4Å: Chain o: G.1053, C.1054, A.1196, A.1197 No protein-ligand interaction detected (PLIP) MG.380: 1 residues within 4Å: Chain o: C.972 No protein-ligand interaction detected (PLIP) MG.381: 1 residues within 4Å: Chain o: C.980 No protein-ligand interaction detected (PLIP) MG.382: 4 residues within 4Å: Chain o: A.1067, G.1068, G.1094, G.1387 No protein-ligand interaction detected (PLIP) MG.383: 2 residues within 4Å: Chain o: U.1083, U.1085 No protein-ligand interaction detected (PLIP) MG.384: 3 residues within 4Å: Chain o: U.1085, U.1086, G.1099 No protein-ligand interaction detected (PLIP) MG.385: 2 residues within 4Å: Chain o: G.1087, G.1088 No protein-ligand interaction detected (PLIP) MG.386: 2 residues within 4Å: Chain o: U.1095, G.1108 No protein-ligand interaction detected (PLIP) MG.387: 1 residues within 4Å: Chain o: G.1177 No protein-ligand interaction detected (PLIP) MG.388: 1 residues within 4Å: Chain o: C.934 No protein-ligand interaction detected (PLIP) MG.389: 3 residues within 4Å: Chain o: A.968, A.969, A.1197 No protein-ligand interaction detected (PLIP) MG.390: 1 residues within 4Å: Chain o: U.1224 No protein-ligand interaction detected (PLIP) MG.391: 2 residues within 4Å: Chain o: C.1303, G.1304 No protein-ligand interaction detected (PLIP) MG.392: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.393: 4 residues within 4Å: Chain o: G.976, C.1359, G.1361, A.1362 No protein-ligand interaction detected (PLIP) MG.394: 3 residues within 4Å: Chain o: C.576, G.577, C.578 No protein-ligand interaction detected (PLIP) MG.395: 2 residues within 4Å: Chain o: C.352, G.354 No protein-ligand interaction detected (PLIP) MG.396: 4 residues within 4Å: Chain o: G.894, G.895, U.904, U.905 No protein-ligand interaction detected (PLIP) MG.397: 1 residues within 4Å: Chain o: G.731 No protein-ligand interaction detected (PLIP) MG.398: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.399: 1 residues within 4Å: Chain o: A.768 No protein-ligand interaction detected (PLIP) MG.400: 5 residues within 4Å: Chain o: U.1498, A.1499, A.1500, G.1504, G.1505 No protein-ligand interaction detected (PLIP) MG.401: 3 residues within 4Å: Chain o: A.572, A.573, A.574 No protein-ligand interaction detected (PLIP) MG.402: 1 residues within 4Å: Chain o: A.814 No protein-ligand interaction detected (PLIP) MG.403: 2 residues within 4Å: Chain o: G.858, G.869 No protein-ligand interaction detected (PLIP) MG.404: 4 residues within 4Å: Chain o: A.559, A.560, U.562, G.566 No protein-ligand interaction detected (PLIP) MG.405: 2 residues within 4Å: Chain o: G.588, G.645 No protein-ligand interaction detected (PLIP) MG.406: 4 residues within 4Å: Chain o: C.507, U.508, A.509, A.510 No protein-ligand interaction detected (PLIP) MG.407: 3 residues within 4Å: Chain o: A.116, G.117, G.289 No protein-ligand interaction detected (PLIP) MG.408: 2 residues within 4Å: Chain o: G.773, G.774 No protein-ligand interaction detected (PLIP) MG.409: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.410: 2 residues within 4Å: Chain o: A.1433, A.1434 No protein-ligand interaction detected (PLIP) MG.411: 2 residues within 4Å: Chain H: G.129 Chain o: U.20 No protein-ligand interaction detected (PLIP) MG.412: 4 residues within 4Å: Chain o: A.595, A.596, G.597, U.598 No protein-ligand interaction detected (PLIP) MG.413: 2 residues within 4Å: Chain o: A.782, A.794 No protein-ligand interaction detected (PLIP) MG.414: 1 residues within 4Å: Chain o: G.21 No protein-ligand interaction detected (PLIP) MG.415: 4 residues within 4Å: Chain o: C.58, A.59, U.387, G.388 No protein-ligand interaction detected (PLIP) MG.416: 4 residues within 4Å: Chain o: G.297, G.299, G.557, G.558 No protein-ligand interaction detected (PLIP) MG.417: 1 residues within 4Å: Chain o: A.572 No protein-ligand interaction detected (PLIP) MG.418: 1 residues within 4Å: Chain o: C.576 No protein-ligand interaction detected (PLIP) MG.419: 2 residues within 4Å: Chain o: C.580, C.758 No protein-ligand interaction detected (PLIP) MG.420: 3 residues within 4Å: Chain o: C.576, A.759, G.760 No protein-ligand interaction detected (PLIP) MG.421: 2 residues within 4Å: Chain o: U.891, A.906 No protein-ligand interaction detected (PLIP) MG.422: 2 residues within 4Å: Chain o: G.1416, G.1417 No protein-ligand interaction detected (PLIP) MG.423: 5 residues within 4Å: Ligands: K.344 Chain o: A.1500, G.1505, A.1507, A.1508 No protein-ligand interaction detected (PLIP) MG.424: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.425: 2 residues within 4Å: Chain o: C.569, G.570 No protein-ligand interaction detected (PLIP)

1 x PRO: PROLINE(Non-covalent)

PRO.25: 9 residues within 4Å: Chain W: A.76 Chain l: A.77 Chain n: A.2451, C.2452, U.2506, U.2585, A.2602 Chain q: R.32, A.33 3 PLIP interactions: 2 Ligand-Ligand interactions, 1 interactions with chain q Hydrogen bonds: P.25, P.25 Hydrophobic interactions: q:R.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gersteuer, F. et al., The SecM arrest peptide traps a pre-peptide bond formation state of the ribosome. Nat Commun (2024)

Release Date

2024-03-20

Peptides

Large ribosomal subunit protein bL33: A
Large ribosomal subunit protein bL34: B
Large ribosomal subunit protein bL35: C
Large ribosomal subunit protein bL36A: D
30S ribosomal protein S2: E
Small ribosomal subunit protein uS3: F
Small ribosomal subunit protein uS4: G
Small ribosomal subunit protein uS5: H
30S ribosomal protein S6, fully modified isoform: I
30S ribosomal protein S7: J
Small ribosomal subunit protein uS8: K
Small ribosomal subunit protein uS9: L
Small ribosomal subunit protein uS12: M
Small ribosomal subunit protein uS13: N
Small ribosomal subunit protein uS14: O
Small ribosomal subunit protein uS15: P
30S ribosomal protein S16: Q
Small ribosomal subunit protein uS17: R
Small ribosomal subunit protein bS18: S
Small ribosomal subunit protein uS19: T
30S ribosomal protein S20: U
Small ribosomal subunit protein bS21: V
Large ribosomal subunit protein uL2: Y
Large ribosomal subunit protein uL3: Z
Large ribosomal subunit protein uL4: 0
Large ribosomal subunit protein uL5: 1
Large ribosomal subunit protein uL6: 2
Large ribosomal subunit protein bL9: 3
Large ribosomal subunit protein uL13: 4
Large ribosomal subunit protein uL14: 5
50S ribosomal protein L15: 6
Large ribosomal subunit protein bL17: 7
Large ribosomal subunit protein uL18: 8
Large ribosomal subunit protein bL19: 9
Large ribosomal subunit protein bL20: a
Large ribosomal subunit protein bL21: b
Large ribosomal subunit protein uL22: c
Large ribosomal subunit protein uL23: d
Large ribosomal subunit protein uL24: e
50S ribosomal protein L25: f
Large ribosomal subunit protein bL27: g
Large ribosomal subunit protein bL28: h
Large ribosomal subunit protein uL29: i
Large ribosomal subunit protein uL30: j
Large ribosomal subunit protein bL32: k
Large ribosomal subunit protein bL31A: m
Small ribosomal subunit protein uS10: p
Secretion monitor: q
Large ribosomal subunit protein uL16: r
Small ribosomal subunit protein uS11: s

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
0

B
1

C
2

D
3

E
B

F
C

G
D

H
E

I
F

J
G

K
H

L
I

M
L

N
M

O
N

P
O

Q
P

R
Q

S
R

T
S

U
T

V
U

Y
c

Z
d

0
e

1
f

2
g

3
h

4
i

5
j

6
k

7
m

8
n

9
o

a
p

b
q

c
r

d
s

e
t

f
u

g
v

h
w

i
x

j
y

k
z

m
4

p
J

q
6

r
l

s
K

Large ribosomal subunit protein bL33

Large ribosomal subunit protein bL34

Large ribosomal subunit protein bL35

Large ribosomal subunit protein bL36A

30S ribosomal protein S2

Small ribosomal subunit protein uS3

Small ribosomal subunit protein uS4

Small ribosomal subunit protein uS5

30S ribosomal protein S6, fully modified isoform

30S ribosomal protein S7

Small ribosomal subunit protein uS8

Small ribosomal subunit protein uS9

Small ribosomal subunit protein uS12

Small ribosomal subunit protein uS13

Small ribosomal subunit protein uS14

Small ribosomal subunit protein uS15

30S ribosomal protein S16

Small ribosomal subunit protein uS17

Small ribosomal subunit protein bS18

Small ribosomal subunit protein uS19

30S ribosomal protein S20

Small ribosomal subunit protein bS21

Large ribosomal subunit protein uL2

Large ribosomal subunit protein uL3

Large ribosomal subunit protein uL4

Large ribosomal subunit protein uL5

Large ribosomal subunit protein uL6

Large ribosomal subunit protein bL9

Large ribosomal subunit protein uL13

Large ribosomal subunit protein uL14

50S ribosomal protein L15

Large ribosomal subunit protein bL17

Large ribosomal subunit protein uL18

Large ribosomal subunit protein bL19

Large ribosomal subunit protein bL20

Large ribosomal subunit protein bL21

Large ribosomal subunit protein uL22

Large ribosomal subunit protein uL23

Large ribosomal subunit protein uL24

50S ribosomal protein L25

Large ribosomal subunit protein bL27

Large ribosomal subunit protein bL28

Large ribosomal subunit protein uL29

Large ribosomal subunit protein uL30

Large ribosomal subunit protein bL32

Large ribosomal subunit protein bL31A

Small ribosomal subunit protein uS10

Secretion monitor

Large ribosomal subunit protein uL16

Small ribosomal subunit protein uS11

Related Entries With Identical Sequence