SMTL ID : 6x98.1

Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11B fragment antigen binding variable domain

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-3-mer
Ligands
9 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
36 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Ozorowski, G. et al., Limited breadth of anti-HIV Env glycan hole antibodies is further hindered by strain-specific peptide interactions. To Be Published
Release Date
2021-12-08
Peptides
BG505 HIV-1 Env gp120: AEI
BG505 HIV-1 Env gp41: BFJ
monoclonal antibody 11B kappa chain: CGK
monoclonal antibody 11B fragment antigen binding heavy chain: DHL
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
E
C
I
G
B
B
F
D
J
I
C
L
G
E
K
J
D
H
H
F
L
K

BG505 HIV-1 Env gp120

Toggle Identical (AEI)

BG505 HIV-1 Env gp41

Toggle Identical (BFJ)

monoclonal antibody 11B kappa chain

Toggle Identical (CGK)

monoclonal antibody 11B fragment antigen binding heavy chain

Toggle Identical (DHL)

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