SMTL ID : 5thr.1

Cryo-EM structure of a BG505 Env-sCD4-17b-8ANC195 complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 8.90 Å
Oligo State
hetero-3-3-3-3-3-3-3-mer
Ligands
3 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
6 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wang, H. et al., Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop. Proc.Natl.Acad.Sci.USA (2016)
Release Date
2016-11-16
Peptides
BG505 SOSIP gp41: ABC
BG505 SOSIP gp120: DEF
T-cell surface glycoprotein CD4: GHI
17b Fab VL domain: JKL
17b Fab VH domain: MNO
8ANC195 G52K5 VH domain: PRT
8ANC195 G52K5 VL domain: QSU
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
R
R
T
T
Q
Q
S
S
U
U

BG505 SOSIP gp41

Toggle Identical (BC)

BG505 SOSIP gp120

Toggle Identical (DEF)

T-cell surface glycoprotein CD4

Toggle Identical (GH)

17b Fab VL domain

Toggle Identical (JKL)

17b Fab VH domain

Toggle Identical (MNO)

8ANC195 G52K5 VH domain

Toggle Identical (PRT)

8ANC195 G52K5 VL domain

Toggle Identical (QSU)

Related Entries With Identical Sequence

1rz8.1 | 1rz8.2 | 1rzj.1 | 1rzk.1 | 1yyl.1 | 1yyl.2 | 1yym.1 | 1yym.2 | 2i5y.1 | 2i5y.2 | 2i60.1 | 2i60.2 | 2nxy.1 | 2nxz.1 | 2ny0.1 | 2ny1.1 | 2ny2.1 | 2ny3.1 | 2ny4.1 | 2ny5.1 | 2ny6.1 | 3lqa.1 | 4jm2.1 | 4p9h.1 | 4p9m.1 | 4rqs.1 | 4rqs.2 | 4tvp.1 | 4zmj.1 | 5a7x.1  more...