SMTL ID : 8tni.1

Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing bi-specific antibody CAP256L-R27 targeting the CD4-binding site and the V2-apex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-1-mer
Ligands
12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
32 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Xu, J. et al., Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing bi-specific antibody CAP256L-R27 targeting the CD4-binding site and the V2-apex. To Be Published
Release Date
2024-05-08
Peptides
HIV-1 BG505 DS-SOSIP gp120: ACE
HIV-1 BG505 DS-SOSIP gp41: BDF
Light chain of bi-specific antibody CAP256L-R27: GHJ
Heavy chain of bi-specific antibody CAP256L-R27: I
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
E
E
B
B
D
D
F
F
G
H
H
I
J
J
I
X

HIV-1 BG505 DS-SOSIP gp120

Toggle Identical (ACE)

HIV-1 BG505 DS-SOSIP gp41

Toggle Identical (DF)

Light chain of bi-specific antibody CAP256L-R27

Toggle Identical (GH)

Heavy chain of bi-specific antibody CAP256L-R27

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